Pairwise Alignments
Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056
Subject, 593 a.a., peptide transport ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021
Score = 216 bits (551), Expect = 1e-60
Identities = 161/514 (31%), Positives = 259/514 (50%), Gaps = 57/514 (11%)
Query: 26 IVTALLSVQQLAISTAQET----LVESLSFELHAHQALTILGETGSGKSLLANAIIGNLP 81
+ ++LLSV+ L + A T +VE LSF+L + L + GE+GSGKS+ A +++ LP
Sbjct: 1 MTSSLLSVKDLTVQVATPTGPKVVVERLSFDLLPGRTLCLAGESGSGKSMTALSLMQLLP 60
Query: 82 AGLR--SQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVA---E 136
+ + G L G+ +A + G+++ ++ QEP +LNP+M G Q+
Sbjct: 61 KPMARIAGGSATLDGEDILALPEARMRRIRGRKIGMIFQEPMTSLNPVMTVGNQLIGAIT 120
Query: 137 VHRLVMGNHAASAALTDSAFQQVALHQD---LSKYPHQLSGGMAQRVAYLCATQTQAPLL 193
H G AA A + QV + + L +YPH+LSGG+ QR+ A +L
Sbjct: 121 AHGNTSGRRAARARAAE-LLDQVQIPEPERRLGQYPHELSGGLRQRIVIAMALAQNPKIL 179
Query: 194 IADEPTKGLDASRRDQIIALLQA-QLTRG-ALLTITHDIEVAEKLGGTIIVMRKGVIQEQ 251
IADEPT LD + + QI+AL++ Q G +++ ITHD+ V ++ ++VM+ G E
Sbjct: 180 IADEPTTALDVTVQAQILALIRKLQADHGISVIMITHDMGVVAEMADEVLVMKHGRTVEH 239
Query: 252 GPAQQVLSHPQSDYTKALINADPRYWPT----TPQSKTG------------EPLLTVDNI 295
++ + +HPQ YTK L++A PR TP+ G +P+L V+N+
Sbjct: 240 ATSRDLFAHPQDAYTKELLSAVPRLGEMAGTETPKRAAGKAVEAGSEPGAEQPMLQVENL 299
Query: 296 AMHRGEKC-----------LFDSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPS-- 342
+ K + +S ++ GE L + G+SGCGKST LL L+ +
Sbjct: 300 TVRFDIKGGILQRPVRRLHAVEGISLSVRRGETLSLVGESGCGKSTTGKALLNLVPWTGD 359
Query: 343 ---QGRIHR-LQAIPLGKALK----LYQDPPSALAKSVTLQTLLEDVCRQHSVE-----R 389
GR R L+ + L+ ++QDP ++L + + L+ + H + R
Sbjct: 360 IRVDGRSTRGLRGSTMRPILRDVQMIFQDPYASLDPRMRVGDLVAEPLVIHGLASGSELR 419
Query: 390 SQIPRLLERLALSPNLLSRKANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAA 449
++ L +R+ LSP + R ++ SGG+ QR I RAL P L+VADE + LD A
Sbjct: 420 DRVEYLFKRVGLSPEQMKRYPHEFSGGQRQRICIARALSLSPKLIVADESVAALDVSIQA 479
Query: 450 STLQLIIELTQEIGCALVLISHDKLALEKTCHRV 483
L L+ ++ E G + + ISHD +E+ HRV
Sbjct: 480 QVLDLLQDIQDETGVSYLFISHDMAVVEQISHRV 513
Score = 107 bits (266), Expect = 1e-27
Identities = 76/237 (32%), Positives = 122/237 (51%), Gaps = 17/237 (7%)
Query: 46 VESLSFELHAHQALTILGETGSGKSLLANAIIGNLP--AGLRSQGKIALFGQYQHQRTQA 103
VE +S + + L+++GE+G GKS A++ +P +R G+ + R
Sbjct: 320 VEGISLSVRRGETLSLVGESGCGKSTTGKALLNLVPWTGDIRVDGRST-----RGLRGST 374
Query: 104 EREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMGNHAASAALTDSA---FQQVA 160
R L + + ++ Q+P+ +L+P MR G+ VAE LV+ A+ + L D F++V
Sbjct: 375 MRPIL--RDVQMIFQDPYASLDPRMRVGDLVAEP--LVIHGLASGSELRDRVEYLFKRVG 430
Query: 161 LH-QDLSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQ--AQ 217
L + + +YPH+ SGG QR+ A L++ADE LD S + Q++ LLQ
Sbjct: 431 LSPEQMKRYPHEFSGGQRQRICIARALSLSPKLIVADESVAALDVSIQAQVLDLLQDIQD 490
Query: 218 LTRGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADP 274
T + L I+HD+ V E++ + VM G E G +Q+ PQ YTK L+ A P
Sbjct: 491 ETGVSYLFISHDMAVVEQISHRVAVMYMGRFVEMGTRRQIFESPQHPYTKKLMAAVP 547
Score = 79.0 bits (193), Expect = 4e-19
Identities = 65/220 (29%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 290 LTVDNIAMHRGEKCLFDSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRIH-- 347
LTV +A G K + + LSF L G L ++G+SG GKS A L+ LL RI
Sbjct: 11 LTVQ-VATPTGPKVVVERLSFDLLPGRTLCLAGESGSGKSMTALSLMQLLPKPMARIAGG 69
Query: 348 ---------------RLQAIPLGKALKLYQDPPSALAKSVTLQTLLEDVCRQHS------ 386
R++ I K ++Q+P ++L +T+ L H
Sbjct: 70 SATLDGEDILALPEARMRRIRGRKIGMIFQEPMTSLNPVMTVGNQLIGAITAHGNTSGRR 129
Query: 387 VERSQIPRLLERLALSP--NLLSRKANQVSGGELQRFAILRALLTRPTLLVADEPTSRLD 444
R++ LL+++ + L + +++SGG QR I AL P +L+ADEPT+ LD
Sbjct: 130 AARARAAELLDQVQIPEPERRLGQYPHELSGGLRQRIVIAMALAQNPKILIADEPTTALD 189
Query: 445 PITAASTLQLIIELTQEIGCALVLISHDKLALEKTCHRVL 484
A L LI +L + G ++++I+HD + + VL
Sbjct: 190 VTVQAQILALIRKLQADHGISVIMITHDMGVVAEMADEVL 229