Pairwise Alignments
Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056
Subject, 625 a.a., peptide transport system ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021
Score = 213 bits (542), Expect = 2e-59
Identities = 161/527 (30%), Positives = 261/527 (49%), Gaps = 66/527 (12%)
Query: 22 QRKNIVTALLSVQQLAISTAQETL----VESLSFELHAHQALTILGETGSGKSLLANAII 77
+ K + +LSV L S + L V+ +SF++ A + + ++GE+GSGKS+ A +I+
Sbjct: 19 ESKPVKQPVLSVSNLMCSFRADGLWSSVVQGVSFDIGARETVAVVGESGSGKSVTALSIM 78
Query: 78 G-NLPAGLRSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAE 136
N P G + +G + L G+ + AE + G +A++ QEP +LNP++ G Q+AE
Sbjct: 79 RLNSPRGTKIEGSVKLGGKELLSLSDAEMRQIRGNDIAMIFQEPMTSLNPVLTIGFQIAE 138
Query: 137 VHRLVMGNHAASAAL-TDSAFQQVALHQDLSK---YPHQLSGGMAQRVAYLCATQTQAPL 192
L G A A T ++V + S+ YPH+ SGGM QRV A + L
Sbjct: 139 SLILHRGLSRAQAENETIRLLEKVRIPAAKSRFHEYPHRFSGGMRQRVMIAMALACKPKL 198
Query: 193 LIADEPTKGLDASRRDQIIALLQ--AQLTRGALLTITHDIEVAEKLGGTIIVMRKGVIQE 250
LIADEPT LD + + QI+ L++ Q ++L ITHD+ V ++ +VM KG E
Sbjct: 199 LIADEPTTALDVTIQAQILELIKELQQEDGMSVLFITHDMGVVAEIADRTVVMYKGQAVE 258
Query: 251 QGPAQQVLSHPQSDYTKALINADPRYWPTTPQSK----------TGE------------- 287
+ + P YT++L++A P+ +S+ TGE
Sbjct: 259 TASTDDIFNRPNHPYTRSLLSAVPKLGSMAGRSRPMRFPVVDRSTGEADVPVEVPDTVKV 318
Query: 288 ---PLLTVDNIAMH-----------RGEKCLFDSLSFTLSAGEILGISGDSGCGKSTLAD 333
P+L V + +G +++SF++ AGE L + G+SGCGKST
Sbjct: 319 SERPVLEVAGLTKRFEVKSGLFSTVKGCVHAVENVSFSIKAGETLALVGESGCGKSTTGR 378
Query: 334 LLLGLLKPSQGRIHRLQAIPLGKALK------------LYQDPPSALAKSVTLQT----- 376
++ L++PS G + L + + K + ++QDP ++L + + T
Sbjct: 379 SVMRLVEPSGGLV-LLDGVDVLKLSQNELRHQRNHMQMIFQDPYASLNPRMNIGTAIAEP 437
Query: 377 LLEDVCRQHSVERSQIPRLLERLALSPNLLSRKANQVSGGELQRFAILRALLTRPTLLVA 436
LL + S ++ LL+++ LSP++ R ++ SGG+ QR I RAL P L+VA
Sbjct: 438 LLINGKGGQSEVADKVAELLQKVGLSPDMAKRFPHEFSGGQRQRICIARALALEPKLIVA 497
Query: 437 DEPTSRLDPITAASTLQLIIELTQEIGCALVLISHDKLALEKTCHRV 483
DE S LD + + L+++L +G A + ISHD +E+ HRV
Sbjct: 498 DEAVSALDVSVKSQVVNLMLDLQARMGLAYLFISHDMAVVERVSHRV 544
Score = 107 bits (266), Expect = 2e-27
Identities = 76/245 (31%), Positives = 125/245 (51%), Gaps = 32/245 (13%)
Query: 46 VESLSFELHAHQALTILGETGSGKSLLANAIIGNL-PAGLRSQGKIALFG---------Q 95
VE++SF + A + L ++GE+G GKS +++ + P+G G + L G +
Sbjct: 350 VENVSFSIKAGETLALVGESGCGKSTTGRSVMRLVEPSG----GLVLLDGVDVLKLSQNE 405
Query: 96 YQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMGNHAASAALTDSA 155
+HQR + ++ Q+P+ +LNP M G +AE L++ + + D
Sbjct: 406 LRHQRNHMQ----------MIFQDPYASLNPRMNIGTAIAEP--LLINGKGGQSEVADKV 453
Query: 156 ---FQQVALHQDLSK-YPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQII 211
Q+V L D++K +PH+ SGG QR+ A + L++ADE LD S + Q++
Sbjct: 454 AELLQKVGLSPDMAKRFPHEFSGGQRQRICIARALALEPKLIVADEAVSALDVSVKSQVV 513
Query: 212 AL-LQAQLTRG-ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKAL 269
L L Q G A L I+HD+ V E++ + VM G I E G + + +PQ YT+ L
Sbjct: 514 NLMLDLQARMGLAYLFISHDMAVVERVSHRVAVMYLGEIVEAGSREAIFQNPQHPYTRRL 573
Query: 270 INADP 274
++A P
Sbjct: 574 LSAVP 578
Score = 86.7 bits (213), Expect = 2e-21
Identities = 67/236 (28%), Positives = 114/236 (48%), Gaps = 30/236 (12%)
Query: 264 DYTKALINADPRYWPTTPQSKTGEPLLTVDNIAMHRGEKCLFDSL----SFTLSAGEILG 319
++ +++ +P+YW + P +P+L+V N+ L+ S+ SF + A E +
Sbjct: 5 EFISPVLDVNPKYWESKPVK---QPVLSVSNLMCSFRADGLWSSVVQGVSFDIGARETVA 61
Query: 320 ISGDSGCGKSTLADLLLGLLKPSQGRIH----------------RLQAIPLGKALKLYQD 363
+ G+SG GKS A ++ L P +I ++ I ++Q+
Sbjct: 62 VVGESGSGKSVTALSIMRLNSPRGTKIEGSVKLGGKELLSLSDAEMRQIRGNDIAMIFQE 121
Query: 364 PPSALAKSVTLQ-TLLEDVCRQHSVERSQIP----RLLE--RLALSPNLLSRKANQVSGG 416
P ++L +T+ + E + + R+Q RLLE R+ + + ++ SGG
Sbjct: 122 PMTSLNPVLTIGFQIAESLILHRGLSRAQAENETIRLLEKVRIPAAKSRFHEYPHRFSGG 181
Query: 417 ELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISHD 472
QR I AL +P LL+ADEPT+ LD A L+LI EL QE G +++ I+HD
Sbjct: 182 MRQRVMIAMALACKPKLLIADEPTTALDVTIQAQILELIKELQQEDGMSVLFITHD 237