Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  222 bits (565), Expect = 3e-62
 Identities = 160/490 (32%), Positives = 255/490 (52%), Gaps = 39/490 (7%)

Query: 30  LLSVQQLAISTAQ--ETLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLR-S 86
           LL+V  L++  A+  + +V+S+SF+L   +   I+GE+GSGK+L   A+I  LP  ++ +
Sbjct: 6   LLTVCGLSLEVARTGQQVVKSVSFDLAPGEIFGIVGESGSGKTLATRALISLLPPTIKVA 65

Query: 87  QGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMGNHA 146
            G ++  G+   +  + E   L G ++ V+ QEP  +LNP M  G Q+ E   L++   A
Sbjct: 66  DGSVSYKGRDVLKMKENELRHLRGAEIGVVFQEPMTSLNPSMTIGRQLEE--GLILHTKA 123

Query: 147 ASA---ALTDSAFQQVALHQD---LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTK 200
           ++    +L     ++V +      LS YPH+ SGGM QR+        +  LLIADEPT 
Sbjct: 124 SAQERRSLILDMLKRVGIRDPEGALSSYPHEFSGGMRQRIMLASVMLLKPALLIADEPTT 183

Query: 201 GLDASRRDQIIALLQAQLTRG---ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQV 257
            LDA  +  ++ L+  +LTR    A+L I+HD+ +  +    I+VM KG I E+G  + +
Sbjct: 184 ALDAVIQRDVMELM-VELTRAEGTAILLISHDLPMVARYTSRIVVMEKGAIVEKGRTEDL 242

Query: 258 LSHPQSDYTKALINADPRYWPTTPQSKTGEPLLTV-DNIAMHRGEKCLF---------DS 307
           L  PQ  YTK L+++ P          T  P+++  D I  + G K LF           
Sbjct: 243 LKAPQHPYTKKLLSSLPFRGRPRQIDLTSVPMISARDIIVDYAGRKSLFRKNKPKRALHG 302

Query: 308 LSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRIHRLQAIPLGK--------ALK 359
           +S  +  GE++ + G SG GK+TL   + GL+  S+GRI + Q  P  +           
Sbjct: 303 VSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVTESEGRI-QFQGRPRTENWTDYRLNCQM 361

Query: 360 LYQDPPSALAKSVTLQTLLEDVCR-----QHSVERSQIPRLLERLALSPNLLSRKANQVS 414
           ++QDP S+L   +T++ L+E+  R         +R +    LE + L  +   R  +++S
Sbjct: 362 VFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGLGVDYAGRYPHELS 421

Query: 415 GGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISHDKL 474
           GG+ QR AI RA+  RP  L+ADEP S LD    A  L L  +L +  G + + ISHD  
Sbjct: 422 GGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGFSCLFISHDLG 481

Query: 475 ALEKTCHRVL 484
            +E+   RV+
Sbjct: 482 VVEQVADRVV 491



 Score =  103 bits (258), Expect = 1e-26
 Identities = 73/233 (31%), Positives = 117/233 (50%), Gaps = 12/233 (5%)

Query: 46  VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAER 105
           +  +S ++H  + + ++G +GSGK+ L   I G +     S+G+I   G     R + E 
Sbjct: 300 LHGVSIDIHEGEVVALVGGSGSGKTTLGRTIAGLVT---ESEGRIQFQG-----RPRTEN 351

Query: 106 EALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMG-NHAASAALTDSAFQQVALHQD 164
              +     ++ Q+P+ +L+P M     V E  R V G +  A    T    ++V L  D
Sbjct: 352 WTDYRLNCQMVFQDPYSSLDPRMTIEALVEEALRPVPGLDGKAKRKRTLETLEEVGLGVD 411

Query: 165 LS-KYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQAQLTRGAL 223
            + +YPH+LSGG  QRVA   A   +   LIADEP   LD + R Q++ L      R   
Sbjct: 412 YAGRYPHELSGGQRQRVAIARAIARRPRFLIADEPVSALDVTVRAQVLDLFSDLQKRYGF 471

Query: 224 --LTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADP 274
             L I+HD+ V E++   ++VM+ G I E+G    +   P+  YT+ L++A P
Sbjct: 472 SCLFISHDLGVVEQVADRVVVMQDGRIIEEGDRDTIFDSPKEAYTRRLLSAIP 524