Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., ABC transporter for D-Raffinose, ATPase component (from data) from Sinorhizobium meliloti 1021

 Score =  212 bits (539), Expect = 3e-59
 Identities = 156/496 (31%), Positives = 252/496 (50%), Gaps = 42/496 (8%)

Query: 30  LLSVQQLAISTAQET----LVESLSFELHAHQALTILGETGSGKSLLANAIIGNLP--AG 83
           ++  +++A+S   E      V+ +SF+L+  + + I+GE+GSGKS+ A  ++G L   A 
Sbjct: 25  VIDARKVAVSFKVENGTVQAVKDVSFQLYRGETVAIVGESGSGKSVTARTVMGLLSKRAT 84

Query: 84  LRSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEV---HRL 140
           +  Q +I   G+   + ++ ER AL G +++++ QEP  +LNP+   G Q+ E    HR 
Sbjct: 85  IAPQARIEYDGRDVLKFSKRERRALRGDRISMIFQEPMSSLNPVYTIGSQIIEAIRAHRR 144

Query: 141 VMGNHAASAALTDSAFQQVALHQD-LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPT 199
           V    AA  AL      Q+   +  L++YPHQLSGG  QRV    A      +LIADEPT
Sbjct: 145 VSRRAAAERALELLRHVQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDPDVLIADEPT 204

Query: 200 KGLDASRRDQIIALLQA--QLTRGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQV 257
             LD + + QI+ L++   Q    A++ ITHD+ V  +    + VM+ G ++E    + +
Sbjct: 205 TALDVTVQAQILNLIRKLQQELGMAVILITHDLTVVRQFSDYVYVMQLGEVKEHNTTEAL 264

Query: 258 LSHPQSDYTKALINADPRYWPTTPQSKTGEPLLTVDNI----AMHRG--------EKCLF 305
            + PQ  YT+ L++++P      P       LL   N+     + +G        E    
Sbjct: 265 FADPQHAYTRRLLSSEPS-GSANPLPDDAPILLDGRNVRVSFTLKKGGFFRPEFKELVAV 323

Query: 306 DSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRIH----------RLQAIPLG 355
           D LS  L   E LG+ G+SG GK+T    L+ LL    G I+          R    PL 
Sbjct: 324 DGLSLNLRRHETLGLVGESGSGKTTFGQALIRLLNTDGGEIYFEGEPIHDKDRKGMRPLR 383

Query: 356 KALKL-YQDPPSALAKSVTLQTLLEDVCRQHSVERSQIPRL------LERLALSPNLLSR 408
             +++ +QDP S+L   +++  ++E+    + +  ++  RL      L    +  N+LSR
Sbjct: 384 SKIQIVFQDPFSSLNPRMSVGQIIEEGLIVNGMGENRKDRLKRVEDALVSAGMPSNILSR 443

Query: 409 KANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVL 468
             ++ SGG+ QR AI RA+   P  ++ DEPTS LD    A  ++L+  L  E G + ++
Sbjct: 444 FPHEFSGGQRQRIAIARAVALEPEFILLDEPTSALDLSVQAQIIELLRRLQDERGLSYLV 503

Query: 469 ISHDKLALEKTCHRVL 484
           ISHD   +   CHRV+
Sbjct: 504 ISHDLKVVRALCHRVV 519



 Score =  118 bits (295), Expect = 6e-31
 Identities = 80/233 (34%), Positives = 126/233 (54%), Gaps = 11/233 (4%)

Query: 46  VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAER 105
           V+ LS  L  H+ L ++GE+GSGK+    A+I  L       G+I   G+  H + +   
Sbjct: 323 VDGLSLNLRRHETLGLVGESGSGKTTFGQALIRLLNT---DGGEIYFEGEPIHDKDRKGM 379

Query: 106 EALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMG---NHAASAALTDSAFQQVALH 162
             L  K + ++ Q+P+ +LNP M  G Q+ E   +V G   N        + A     + 
Sbjct: 380 RPLRSK-IQIVFQDPFSSLNPRMSVG-QIIEEGLIVNGMGENRKDRLKRVEDALVSAGMP 437

Query: 163 QD-LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQA-QLTR 220
            + LS++PH+ SGG  QR+A   A   +   ++ DEPT  LD S + QII LL+  Q  R
Sbjct: 438 SNILSRFPHEFSGGQRQRIAIARAVALEPEFILLDEPTSALDLSVQAQIIELLRRLQDER 497

Query: 221 G-ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINA 272
           G + L I+HD++V   L   ++VM+ G I E+GP  +VL++P++ YT+ L+ A
Sbjct: 498 GLSYLVISHDLKVVRALCHRVVVMQDGKIVEEGPVSEVLNNPKTAYTERLVKA 550