Pairwise Alignments
Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056
Subject, 557 a.a., oligopeptidemurein peptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021
Score = 219 bits (558), Expect = 2e-61
Identities = 163/516 (31%), Positives = 254/516 (49%), Gaps = 57/516 (11%)
Query: 24 KNIVTALLSVQQLAI----STAQETLVESLSFELHAHQALTILGETGSGKSLLANAIIGN 79
+++ T LL V+ L + +A ++ +SFEL + L I+GE+G+GKS + NAI+G
Sbjct: 4 EHVTTPLLRVENLGLRHVSGSATTPILSDVSFELGRGEILGIIGESGAGKSTVGNAILGL 63
Query: 80 L-PAGLRSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVH 138
L P ++ G I G+ T ERE L G++++ + Q+ +L+P+M G QV E
Sbjct: 64 LSPEFQQTSGTIEFDGKAIDGMTADERETLRGRRISAIFQDHTASLDPLMSVGAQVEETC 123
Query: 139 RLV---MGNHAASAALTDSAFQQVALHQDLSKY---PHQLSGGMAQRVAYLCATQTQAPL 192
+ + A A D +V + + +Y PHQ SGG QRV A +
Sbjct: 124 LALDSSLSRREARARAID-LLARVGIPEPERRYRNYPHQFSGGQRQRVVIAIALAGSPDI 182
Query: 193 LIADEPTKGLDASRRDQIIALLQAQL--TRGALLTITHDIEVAEKLGGTIIVMRKGVIQE 250
+IADEPT LDA+ + Q++ LL+ + T +++ +THD+ V ++ ++VMRKG + E
Sbjct: 183 IIADEPTSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVLVMRKGQVVE 242
Query: 251 QGPAQQVLSHPQSDYTKALINADPRYWPTTPQSKTGE---------------PLLTVDNI 295
+L P+ DYTK L+ A PR T +K + PLL + +
Sbjct: 243 ADRTTAILDQPRHDYTKKLLAAVPRLRIPTRTAKAEDNGRQADSPAIDSDQNPLLIAEGL 302
Query: 296 AMH-----------RGEKCL-FDSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQ 343
+ RG+ + L+ G I GI G+SG GK+T +L GL
Sbjct: 303 SKQFAPQGFAWGIGRGKPRFGLRDVGIRLARGSITGIVGESGSGKTTFGRILAGLDTAPT 362
Query: 344 GRI----HRLQAIP-------LGKALKLYQDPPSALAKSVTLQTLLEDVCR-----QHSV 387
GRI H LG+ ++QDP +L +T+ L++ R +
Sbjct: 363 GRITIGEHPFDVSQSGRRSGLLGRVQMIFQDPSVSLNPRMTIGETLDESIRFGARIRSGE 422
Query: 388 ERSQIPRLLERLALSPNLLSRKANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPIT 447
E + + +++RL L +LL R +Q+SGG+ QR I RALL RP ++VADEPTS LD
Sbjct: 423 EPADLAAMMDRLGLPRSLLGRHPHQLSGGQKQRVCIARALLARPEIIVADEPTSALDVSV 482
Query: 448 AASTLQLIIELTQEIGCALVLISHDKLALEKTCHRV 483
A +QL+ + E +V ISHD ++ C V
Sbjct: 483 QAEIVQLLKDTIAERAMTMVFISHDLAIVQAMCSSV 518
Score = 101 bits (252), Expect = 6e-26
Identities = 72/224 (32%), Positives = 123/224 (54%), Gaps = 18/224 (8%)
Query: 61 ILGETGSGKSLLANAIIGNLPAGLRSQ--GKIALFGQYQHQRTQAEREALWGKQLAVLPQ 118
I+GE+GSGK+ G + AGL + G+I + G++ +Q+ R + ++ ++ Q
Sbjct: 339 IVGESGSGKTTF-----GRILAGLDTAPTGRITI-GEHPFDVSQSGRRSGLLGRVQMIFQ 392
Query: 119 EPWHALNPIMRAGEQVAEV----HRLVMGNHAAS-AALTDSAFQQVALHQDLSKYPHQLS 173
+P +LNP M GE + E R+ G A AA+ D +L L ++PHQLS
Sbjct: 393 DPSVSLNPRMTIGETLDESIRFGARIRSGEEPADLAAMMDRLGLPRSL---LGRHPHQLS 449
Query: 174 GGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQAQLTRGAL--LTITHDIE 231
GG QRV A + +++ADEPT LD S + +I+ LL+ + A+ + I+HD+
Sbjct: 450 GGQKQRVCIARALLARPEIIVADEPTSALDVSVQAEIVQLLKDTIAERAMTMVFISHDLA 509
Query: 232 VAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADPR 275
+ + + ++ + + G I++ GP + + S + YT+ALINA P+
Sbjct: 510 IVQAMCSSVYIFKDGRIEDFGPTEFIFSRSDNPYTRALINARPQ 553
Score = 91.7 bits (226), Expect = 6e-23
Identities = 69/226 (30%), Positives = 109/226 (48%), Gaps = 30/226 (13%)
Query: 288 PLLTVDNIAMHR----GEKCLFDSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKP-- 341
PLL V+N+ + + +SF L GEILGI G+SG GKST+ + +LGLL P
Sbjct: 9 PLLRVENLGLRHVSGSATTPILSDVSFELGRGEILGIIGESGAGKSTVGNAILGLLSPEF 68
Query: 342 --SQGRIH------------RLQAIPLGKALKLYQDPPSALAKSVTLQTLLEDVCR---- 383
+ G I + + + ++QD ++L +++ +E+ C
Sbjct: 69 QQTSGTIEFDGKAIDGMTADERETLRGRRISAIFQDHTASLDPLMSVGAQVEETCLALDS 128
Query: 384 --QHSVERSQIPRLLERLALSPNLLSRKAN---QVSGGELQRFAILRALLTRPTLLVADE 438
R++ LL R+ + P R N Q SGG+ QR I AL P +++ADE
Sbjct: 129 SLSRREARARAIDLLARVGI-PEPERRYRNYPHQFSGGQRQRVVIAIALAGSPDIIIADE 187
Query: 439 PTSRLDPITAASTLQLIIELTQEIGCALVLISHDKLALEKTCHRVL 484
PTS LD L+L+ L E G +++L++HD + + +RVL
Sbjct: 188 PTSALDATVQKQVLELLKILVDETGVSIILVTHDMGVISEITNRVL 233