Pairwise Alignments
Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056
Subject, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021
Score = 229 bits (584), Expect = 2e-64
Identities = 164/474 (34%), Positives = 251/474 (52%), Gaps = 34/474 (7%)
Query: 30 LLSVQQLAIS--TAQETL--VESLSFELHAHQALTILGETGSGKSLLANAIIG--NLPAG 83
LL V+ L++ TA + V+S+S+ L + L ILGE+GSGKS+ ++AI+ ++P G
Sbjct: 5 LLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDMPPG 64
Query: 84 LRSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEV---HRL 140
S G+I L G+ ER + G+++A++ Q+P LNP+ G Q++E H L
Sbjct: 65 RISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMTTHGL 124
Query: 141 VMGNHAASAALTDSAFQQVALHQD---LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADE 197
G+ A AL ++V + + + KYPH+ SGG QRV A + LLIADE
Sbjct: 125 A-GSKAREEALR--LLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIADE 181
Query: 198 PTKGLDASRRDQIIALLQA--QLTRGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQ 255
PT LD + + +++ LL+ + T A+L ITHD+ V ++ ++VM KG I E G +
Sbjct: 182 PTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGTVR 241
Query: 256 QVLSHPQSDYTKALINADPRYWPTTPQSKTGEPLLTVDNIAMHRGEKCLFDSLSFTLSAG 315
++ +PQ YT+ LI A P EPLL+V ++ G +SF L G
Sbjct: 242 EIYKNPQHPYTQKLIAAAPGKGAMHEPGARAEPLLSVRDVRKTYGSFEALKGISFDLMPG 301
Query: 316 EILGISGDSGCGKSTLADLLLGLLKPSQG----RIHRLQAIPLGKALKL-------YQDP 364
E + + G+SG GKSTLA LL L +P G + L A+ + KL +QDP
Sbjct: 302 ETMAVVGESGSGKSTLARALLRLDEPDSGTALWKGRDLFALSPAELYKLRRDLQMVFQDP 361
Query: 365 PSALAKSVTLQTLLEDVCRQH------SVERSQIPRLLERLALSPNLLSRKANQVSGGEL 418
+L +T+ L+ + H + R ++ LL ++ LS +SR +Q SGG+
Sbjct: 362 TQSLNPRMTVYQLISEAWVIHPDILPKAKWRERVAELLVQVGLSAEHMSRYPHQFSGGQR 421
Query: 419 QRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISHD 472
QR AI RAL P L++ DE S LD A ++L+ L +E+G A + I+HD
Sbjct: 422 QRIAIARALALEPQLIICDEAVSALDVSVQAQVIELLDRLRREMGIAFIFIAHD 475
Score = 102 bits (253), Expect = 4e-26
Identities = 75/249 (30%), Positives = 124/249 (49%), Gaps = 11/249 (4%)
Query: 30 LLSVQQLAISTAQETLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGK 89
LLSV+ + + ++ +SF+L + + ++GE+GSGKS LA A+ L G
Sbjct: 275 LLSVRDVRKTYGSFEALKGISFDLMPGETMAVVGESGSGKSTLARAL---LRLDEPDSGT 331
Query: 90 IALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAE---VHRLVMGNHA 146
G+ + AE L + L ++ Q+P +LNP M + ++E +H ++
Sbjct: 332 ALWKGRDLFALSPAELYKL-RRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPDILPKAK 390
Query: 147 ASAALTDSAFQQVALHQDLSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASR 206
+ + Q + +S+YPHQ SGG QR+A A + L+I DE LD S
Sbjct: 391 WRERVAELLVQVGLSAEHMSRYPHQFSGGQRQRIAIARALALEPQLIICDEAVSALDVSV 450
Query: 207 RDQIIALLQAQLTRG---ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQS 263
+ Q+I LL +L R A + I HD+ V ++VM++G + E G ++V P+
Sbjct: 451 QAQVIELLD-RLRREMGIAFIFIAHDLPVVRDFADYVMVMQQGEVVELGTVREVFDTPRQ 509
Query: 264 DYTKALINA 272
YT+AL+ A
Sbjct: 510 AYTRALLAA 518
Score = 91.7 bits (226), Expect = 6e-23
Identities = 72/225 (32%), Positives = 109/225 (48%), Gaps = 27/225 (12%)
Query: 287 EPLLTVDNIAMH----RGEKCLFDSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPS 342
E LL V N+++ G S+S+ L GE L I G+SG GKS + ++ L+
Sbjct: 3 EHLLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDMP 62
Query: 343 QGRIHRLQAIPLGKAL-----------------KLYQDPPSALAKSVTLQTLLEDVCRQH 385
GRI + + G+ L ++QDP S L ++ + + H
Sbjct: 63 PGRISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMTTH 122
Query: 386 ----SVERSQIPRLLERLAL-SPNLLSRK-ANQVSGGELQRFAILRALLTRPTLLVADEP 439
S R + RLL R+ + P RK ++ SGG+ QR I AL RP LL+ADEP
Sbjct: 123 GLAGSKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIADEP 182
Query: 440 TSRLDPITAASTLQLIIELTQEIGCALVLISHDKLALEKTCHRVL 484
T+ LD A L+L+ EL +E G A+++I+HD + + RV+
Sbjct: 183 TTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVV 227