Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  233 bits (594), Expect = 1e-65
 Identities = 167/476 (35%), Positives = 251/476 (52%), Gaps = 42/476 (8%)

Query: 49  LSFELHAHQALTILGETGSGKSLLANAIIG--NLPAGLRSQGKIALFGQYQHQRTQAERE 106
           +SF + A + L ILGE+GSGKS+ A+AI+G  + P G    G +A  G+     ++ ER 
Sbjct: 29  VSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPGDICAGSVAYRGRDLSSLSEGERR 88

Query: 107 ALWGKQLAVLPQEPWHALNPIMRAG---EQVAEVHRLVMGNHAASAALTDSAFQQVALHQ 163
            L G+++A++ Q+P   LNP+   G   E+V  VH +  G  A   A+      +V + +
Sbjct: 89  DLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVHGVASGAEARQRAI--EILGRVGIPE 146

Query: 164 D---LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQA-QLT 219
               + +YPHQ SGG  QR+    A   +  +LIADEPT  LD S + QI+ LL+  Q  
Sbjct: 147 PEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADEPTTALDVSVQAQILELLKKLQAE 206

Query: 220 RG-ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADPRY-- 276
            G A++ ITHD+EVA  +   +IVM+ G I E+G A+ V  +P   YT+ LINA P    
Sbjct: 207 DGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEARAVFENPAHSYTRTLINALPHADD 266

Query: 277 -WPTTPQSKTGEPLLTVDNIAMHRGEKCLF----------DSLSFTLSAGEILGISGDSG 325
             P  P    G+P+L V NI         F           +LSF ++AGE +GI G+SG
Sbjct: 267 RAPPRPARPAGKPILEVKNIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESG 326

Query: 326 CGKSTLADLLLGLLKPSQG----------RIHRLQAIPLGKALKL-YQDPPSALAKSVTL 374
            GKST+A +LLGL + S G          ++ R Q +   + +++ +QDP S++   +T+
Sbjct: 327 SGKSTVARVLLGLNEASGGEALFHGRDVLKMDRKQLLAFRRKVQMVFQDPYSSMNPRMTV 386

Query: 375 QTLLEDVCRQHS--VE----RSQIPRLLERLALSPNLLSRKANQVSGGELQRFAILRALL 428
             ++ +  R H   +E    R ++  LL  + L+P    R  +Q SGG+ QR AI RAL 
Sbjct: 387 FDIVSEPWRIHKDILEKTRWRDRVTELLGLVGLNPEHAKRYPHQFSGGQRQRIAIARALA 446

Query: 429 TRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISHDKLALEKTCHRVL 484
             P L+V DE  S LD       + L+ EL   +G A + I+HD   +     R++
Sbjct: 447 CDPELVVCDEAVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRII 502



 Score =  110 bits (274), Expect = 2e-28
 Identities = 77/241 (31%), Positives = 127/241 (52%), Gaps = 12/241 (4%)

Query: 46  VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAER 105
           V++LSF++ A + + I+GE+GSGKS +A  ++G   A     G  ALF      +   ++
Sbjct: 306 VKNLSFDVAAGETIGIVGESGSGKSTVARVLLGLNEAS----GGEALFHGRDVLKMDRKQ 361

Query: 106 EALWGKQLAVLPQEPWHALNPIMRAGEQVAE---VHRLVMGNHAASAALTDSAFQQVALH 162
              + +++ ++ Q+P+ ++NP M   + V+E   +H+ ++        +T+     V L+
Sbjct: 362 LLAFRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTRWRDRVTE-LLGLVGLN 420

Query: 163 QDLSK-YPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQAQLTRG 221
            + +K YPHQ SGG  QR+A   A      L++ DE    LD S + Q+I LL     R 
Sbjct: 421 PEHAKRYPHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSVQVQVIDLLAELRDRL 480

Query: 222 AL--LTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADPR-YWP 278
            L  + ITHD+ +       IIVM+ G I E    +++  +PQ  YT+ LINA P+  W 
Sbjct: 481 GLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHAYTRQLINATPKPKWQ 540

Query: 279 T 279
           T
Sbjct: 541 T 541