Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  211 bits (537), Expect = 5e-59
 Identities = 160/491 (32%), Positives = 251/491 (51%), Gaps = 36/491 (7%)

Query: 30  LLSVQQLAISTA----QETLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLR 85
           +LSV+ L I+      +   V  +SF++   + + +LGE+GSGKS++A+AI+G LP GLR
Sbjct: 10  VLSVRDLTIALPPGADRPHAVSDISFDVPPGKVVCLLGESGSGKSVIASAIMGLLPPGLR 69

Query: 86  S-QGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEV-HRLVMG 143
             +G I L GQ     +QA   AL G  +A++ QEP  ALNP+M  G Q+ E+  + V  
Sbjct: 70  PVKGAIELRGQALLSCSQAALRALRGTTMAMVFQEPMTALNPVMTCGAQIDEMLAQHVKR 129

Query: 144 NHAASAALTDSAFQQVALHQD---LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTK 200
             A   A   +  ++V L +     + YPHQLSGG  QR+    A   +  LLI DEPT 
Sbjct: 130 PKAERRAAILAIMERVRLPEPERIYASYPHQLSGGQRQRIVIAMALILKPALLICDEPTT 189

Query: 201 GLDASRRDQIIAL-LQAQLTRG-ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVL 258
            LD + + +I+ L L+ Q   G A+L ITHD  V  ++   ++V+  G + E+G    VL
Sbjct: 190 ALDVTTQAEILKLILELQRENGTAVLFITHDFGVVAEIADEVVVLELGAMIEKGDKHAVL 249

Query: 259 SHPQSDYTKALINADPRYWPTT-PQSKTGEPLLTVDNIAMHR------GEKCLFDS---L 308
           + P+  YTK L+ A P   P   P  +   PLL   ++          G++ +  +   +
Sbjct: 250 TAPRQPYTKMLLAAVPELSPPDRPAVENAYPLLQAKDLCKTYVSGGWPGKRRVVQAAKGV 309

Query: 309 SFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRIH----------RLQAIPLGKAL 358
           S  +  GE +GI G+SG GKST+A  +  L+ P+ G I           + +  P  + +
Sbjct: 310 SLMVRPGETIGIVGESGSGKSTVARCIARLIDPTSGDIFADGRSVATATKRELSPFRRHV 369

Query: 359 KL-YQDPPSALAKSVTLQTLLEDVCRQHSVERSQI----PRLLERLALSPNLLSRKANQV 413
           ++ +QDP  +L    T+   + +      V R++       L+  + L P+ L R  N+ 
Sbjct: 370 QVVFQDPYRSLNPRQTVGESIIEGPVNFGVPRAEAWAKAEELMHLVRLKPDALRRYPNEF 429

Query: 414 SGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISHDK 473
           SGG+ QR +I RAL   P +L+ADE  S LD    A  L L+ E+   +   ++ ++HD 
Sbjct: 430 SGGQRQRISIARALACNPKVLIADEAVSALDVSVQAQILTLLEEIQGRLRIGILFVTHDL 489

Query: 474 LALEKTCHRVL 484
               + C  VL
Sbjct: 490 RVASQICDHVL 500



 Score =  101 bits (251), Expect = 7e-26
 Identities = 75/233 (32%), Positives = 118/233 (50%), Gaps = 11/233 (4%)

Query: 47  ESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAERE 106
           + +S  +   + + I+GE+GSGKS +A  I     A L       +F   +   T  +RE
Sbjct: 307 KGVSLMVRPGETIGIVGESGSGKSTVARCI-----ARLIDPTSGDIFADGRSVATATKRE 361

Query: 107 -ALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMGNHAASAALTDSAFQQVALHQD- 164
            + + + + V+ Q+P+ +LNP    GE + E         A + A  +     V L  D 
Sbjct: 362 LSPFRRHVQVVFQDPYRSLNPRQTVGESIIEGPVNFGVPRAEAWAKAEELMHLVRLKPDA 421

Query: 165 LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALL---QAQLTRG 221
           L +YP++ SGG  QR++   A      +LIADE    LD S + QI+ LL   Q +L  G
Sbjct: 422 LRRYPNEFSGGQRQRISIARALACNPKVLIADEAVSALDVSVQAQILTLLEEIQGRLRIG 481

Query: 222 ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADP 274
            +L +THD+ VA ++   ++VM KG I E+G  + V   P+  YT+ L+ A P
Sbjct: 482 -ILFVTHDLRVASQICDHVLVMYKGEIVEEGAIRDVFFAPRHPYTRKLLAASP 533