Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 550 a.a., ABC transporter ATP-binding protein from Rhodopseudomonas palustris CGA009

 Score =  220 bits (561), Expect = 8e-62
 Identities = 161/485 (33%), Positives = 246/485 (50%), Gaps = 35/485 (7%)

Query: 33  VQQLAISTAQETLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGL--RSQGKI 90
           V +L  S   + +++ +S  + A + + ++GE+GSGKS+ +   +G LP G+   S G+I
Sbjct: 12  VVRLGRSGHGDKVIDGISLNVRAGETMCLVGESGSGKSVTSLTTMGLLPKGVLQASGGEI 71

Query: 91  ALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMGNHAASAA 150
            L G+     ++     L   ++A++ QEP  ALNP++  G+Q+ EV R      A    
Sbjct: 72  RLAGENVLAASERRLRQLRASRMAMIFQEPMTALNPVVPVGKQIDEVLRFHTDLPARERR 131

Query: 151 LTD-SAFQQVAL---HQDLSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASR 206
                  QQV L    +  + YPH+LSGG  QR+    A   +  LLIADEPT  LD + 
Sbjct: 132 RRILDMMQQVRLPDVERIFASYPHRLSGGQRQRIMIAMALVLEPKLLIADEPTTALDVTT 191

Query: 207 RDQIIALL-QAQLTRG-ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSD 264
           + QI+ L+ + Q   G A+L ITHD+ V  ++   + VMR+G + E GP + VL  PQ +
Sbjct: 192 QKQILTLIRELQQAHGTAVLFITHDMGVVAEIADRVAVMRQGRLVETGPLEAVLRRPQME 251

Query: 265 YTKALINADPRYWPTTPQSKTGEPLLTVDN-----------IAMHRGEKCLFDSLSFTLS 313
           YT+ L++A P   P  P+     P++   N           +  HR E      ++ TL 
Sbjct: 252 YTRNLLSAVPSLVPRAPRPANRTPVVLEANELGKVYRERSLLGRHR-EVVAAQDVTLTLH 310

Query: 314 AGEILGISGDSGCGKSTLADLLLGLLKPSQGRIH-----------RLQAIPLGKALKLYQ 362
            G  LGI G+SG GKST+A  ++ L+ P+ G I            RL      K   ++Q
Sbjct: 311 KGRTLGIVGESGSGKSTVARCIVRLIDPTSGGIRLAGREISELSRRLLRPHRQKIQIIFQ 370

Query: 363 DPPSALAKSVTLQTLLEDVCRQHSVERSQIP----RLLERLALSPNLLSRKANQVSGGEL 418
           DP  +L   V++   + +    + + R+Q      +LLE + L  + +SR  +Q SGG+ 
Sbjct: 371 DPYRSLNPRVSVGESIAEGPINYGMPRAQAMAKARQLLELVHLPADAISRFPHQFSGGQR 430

Query: 419 QRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISHDKLALEK 478
           QR AI RAL   P +LVADE  S LD    A  L L+ E+   +G AL+ I+HD     +
Sbjct: 431 QRIAIARALALDPDVLVADEAVSALDVSVQAQVLNLLDEIQTRLGIALLFITHDLRVAAQ 490

Query: 479 TCHRV 483
            C  V
Sbjct: 491 ICDDV 495



 Score =  127 bits (318), Expect = 1e-33
 Identities = 85/237 (35%), Positives = 131/237 (55%), Gaps = 12/237 (5%)

Query: 47  ESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAERE 106
           + ++  LH  + L I+GE+GSGKS +A  I+  +     + G I L G+   + ++  R 
Sbjct: 303 QDVTLTLHKGRTLGIVGESGSGKSTVARCIVRLIDP---TSGGIRLAGR---EISELSRR 356

Query: 107 AL--WGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMGNHAASAALTDSAFQQVALHQD 164
            L    +++ ++ Q+P+ +LNP +  GE +AE         A + A      + V L  D
Sbjct: 357 LLRPHRQKIQIIFQDPYRSLNPRVSVGESIAEGPINYGMPRAQAMAKARQLLELVHLPAD 416

Query: 165 -LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQAQLTRG-- 221
            +S++PHQ SGG  QR+A   A      +L+ADE    LD S + Q++ LL    TR   
Sbjct: 417 AISRFPHQFSGGQRQRIAIARALALDPDVLVADEAVSALDVSVQAQVLNLLDEIQTRLGI 476

Query: 222 ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADP-RYW 277
           ALL ITHD+ VA ++   + VM KG + EQGPA +VL+HP+  YT+ L+ A P R+W
Sbjct: 477 ALLFITHDLRVAAQICDDVAVMEKGRVVEQGPAAEVLTHPKQAYTRQLLEAAPGRHW 533