Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein from Phaeobacter inhibens DSM 17395

 Score =  213 bits (543), Expect = 1e-59
 Identities = 155/499 (31%), Positives = 251/499 (50%), Gaps = 49/499 (9%)

Query: 28  TALLSVQQLAISTAQE----TLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAG 83
           T LLSV+ L +S  Q+      V  +SF +   + + ++GE+GSGKS+ A + +  L   
Sbjct: 12  TPLLSVRDLRVSFRQDGKVTEAVRGVSFSVGRGETVALVGESGSGKSVSALSTVSLLGDS 71

Query: 84  LRSQGKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLV-- 141
               G +   G      ++     + G  ++ + QEP  +LNP+    +Q+AE   L   
Sbjct: 72  ATVSGSVTYDGTEMVGASERHLRQVRGNDISFIFQEPMTSLNPLHTIEKQLAESLALHQG 131

Query: 142 MGNHAASAALTDSAFQQVALHQD---LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEP 198
           +G  AA   + D    +V +      L  YPHQLSGG  QRV    A   +  +LIADEP
Sbjct: 132 LGGAAARERIVD-LLNRVGIRDAETRLDAYPHQLSGGQRQRVMIAMALANKPDILIADEP 190

Query: 199 TKGLDASRRDQIIALL-QAQLTRG-ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQ 256
           T  LD + + QI+ LL   + + G  LL ITHD+ +  ++   + VM+ G I E GP  +
Sbjct: 191 TTALDVTIQVQILDLLADLKASEGMGLLFITHDLSIVRRIADRVCVMQAGEIVESGPTAE 250

Query: 257 VLSHPQSDYTKALINADPRYWPTTPQSKTGEPLLTVDNIAMHR-----------GEKCLF 305
           + ++PQ  YT+ L++A+P   P  P SK  + L+  +++ +             G     
Sbjct: 251 IFANPQHPYTRKLLDAEPTGQPQ-PVSKDAKELIRTEDLKVWFPIQKGFLKRTVGHVKAV 309

Query: 306 DSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRIH---------------RLQ 350
           +  S ++ AGE LGI G+SG GK+TLA  ++ L+  S+GR+                RL+
Sbjct: 310 NPTSLSVRAGETLGIVGESGSGKTTLALAIMRLIA-SEGRVEFQGQDLRQWSTRDLRRLR 368

Query: 351 AIPLGKALKLYQDPPSALAKSVTLQTLLEDVCRQHSVERSQIPR-----LLERLALSPNL 405
           A        ++QDP  AL+  +T   ++ +    H+V++ + PR     ++  + L P  
Sbjct: 369 A----DMQIVFQDPFGALSPRMTCAQIIAEGLAIHNVDQDRDPRDLVAEVMSEVGLDPAF 424

Query: 406 LSRKANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCA 465
           + R  ++ SGG+ QR AI RA++ RP L+V DEPTS LD       + L+ +L +  G A
Sbjct: 425 MDRYPHEFSGGQRQRIAIARAMVLRPKLVVLDEPTSALDMTVQVQIVNLLRDLQERYGLA 484

Query: 466 LVLISHDKLALEKTCHRVL 484
            + ISHD   +    H+++
Sbjct: 485 YLFISHDLNVVRAMSHKMI 503



 Score =  102 bits (253), Expect = 4e-26
 Identities = 73/233 (31%), Positives = 120/233 (51%), Gaps = 13/233 (5%)

Query: 46  VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAER 105
           V   S  + A + L I+GE+GSGK+ LA AI+  +     S+G++   GQ   Q +  + 
Sbjct: 309 VNPTSLSVRAGETLGIVGESGSGKTTLALAIMRLIA----SEGRVEFQGQDLRQWSTRDL 364

Query: 106 EALWGKQLAVLPQEPWHALNPIMRAGEQVAE---VHRLVMGNHAASAALTDSAFQQVALH 162
             L    + ++ Q+P+ AL+P M   + +AE   +H +          L      +V L 
Sbjct: 365 RRLRA-DMQIVFQDPFGALSPRMTCAQIIAEGLAIHNVDQDRDPRD--LVAEVMSEVGLD 421

Query: 163 QD-LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQAQLTRG 221
              + +YPH+ SGG  QR+A   A   +  L++ DEPT  LD + + QI+ LL+    R 
Sbjct: 422 PAFMDRYPHEFSGGQRQRIAIARAMVLRPKLVVLDEPTSALDMTVQVQIVNLLRDLQERY 481

Query: 222 AL--LTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINA 272
            L  L I+HD+ V   +   +IVM++G + E G A ++ ++P   YT+ L+ A
Sbjct: 482 GLAYLFISHDLNVVRAMSHKMIVMKQGDVVEAGSAAELFNNPSDPYTQQLLAA 534