Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 618 a.a., dipeptide ABC transporter ATP-binding protein from Pantoea sp. MT58

 Score =  202 bits (514), Expect = 3e-56
 Identities = 155/500 (31%), Positives = 239/500 (47%), Gaps = 63/500 (12%)

Query: 46  VESLSFELHAHQALTILGETGSGKSLLANAIIGNLP-AGLRSQGKIALFGQYQH-----Q 99
           V  LS +L   + L ++GE+GSGKS+ + A++  +  AG    G++ L  +        +
Sbjct: 35  VRHLSLDLFRGETLALVGESGSGKSVTSLALMRLIEQAGGIVSGEVQLRRRNGDVLDLMR 94

Query: 100 RTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMG-NHAASAALTDSAFQQ 158
            ++ +   + G  +A++ QEP  +LNP+   GEQ+AE  RL  G +HA + A        
Sbjct: 95  ASKGQMRRVRGADMAMIFQEPMTSLNPVFSVGEQIAESIRLHQGLSHAGALAEARRMLDL 154

Query: 159 VAL---HQDLSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIAL-- 213
           V +      LS++PHQLSGGM QRV    A   +  LLIADEPT  LD + + QI+ L  
Sbjct: 155 VRIPDAQNVLSRFPHQLSGGMRQRVMIAMALCCKPALLIADEPTTALDVTIQAQILQLIR 214

Query: 214 -LQAQLTRGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINA 272
            LQ ++  G +  ITHD+ V  ++   + VM +G + E  P  ++ S PQ  YT+AL+ A
Sbjct: 215 VLQKEMQMGVIF-ITHDMGVVAEMADRVQVMYRGEVVENAPVAELFSAPQQPYTQALLAA 273

Query: 273 DPRYW----------------------PTTPQSKTGEPLLTVDNIAMH-----------R 299
            P+                        P     +   P+L V ++              +
Sbjct: 274 VPKLGSMQGQPLPAKFPLLHSDAVDDVPQDTVRRLQPPILQVRDLVTRFDIRGGLLNRVK 333

Query: 300 GEKCLFDSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQG-------RIHRLQAI 352
                 + +SF L AGE L + G+SGCGKST    LL L+    G       RI  L   
Sbjct: 334 SRVHAVEKVSFDLYAGETLALVGESGCGKSTTGRSLLKLVASQGGTLTFDGQRIDHLSGA 393

Query: 353 PLGKALK----LYQDPPSALAKSVT-----LQTLLEDVCRQHSVERSQIPRLLERLALSP 403
            L    +    ++QDP ++L   +T     ++ LL            ++  LL+++ L P
Sbjct: 394 ALAHLRRDIQFIFQDPYASLDPRLTVGFSIMEPLLVHKAMPRREAEQRVAWLLDKVGLLP 453

Query: 404 NLLSRKANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIG 463
               R  ++ SGG+ QR  I RAL   P +++ADE  S LD    A  + L+++L +E G
Sbjct: 454 EHAQRYPHEFSGGQRQRICIARALALNPKVVIADESVSALDVSIQAQIINLMLDLQREFG 513

Query: 464 CALVLISHDKLALEKTCHRV 483
            A + ISHD   +E+  HRV
Sbjct: 514 IAFLFISHDMAVVERISHRV 533



 Score =  104 bits (260), Expect = 8e-27
 Identities = 83/257 (32%), Positives = 121/257 (47%), Gaps = 17/257 (6%)

Query: 46  VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAER 105
           VE +SF+L+A + L ++GE+G GKS    +++  +     SQG    F   +        
Sbjct: 339 VEKVSFDLYAGETLALVGESGCGKSTTGRSLLKLVA----SQGGTLTFDGQRIDHLSGAA 394

Query: 106 EALWGKQLAVLPQEPWHALNPIMRAGEQVAE---VHRLVMGNHAAS--AALTDSAFQQVA 160
            A   + +  + Q+P+ +L+P +  G  + E   VH+ +    A    A L D       
Sbjct: 395 LAHLRRDIQFIFQDPYASLDPRLTVGFSIMEPLLVHKAMPRREAEQRVAWLLDKVG---L 451

Query: 161 LHQDLSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIAL-LQAQLT 219
           L +   +YPH+ SGG  QR+    A      ++IADE    LD S + QII L L  Q  
Sbjct: 452 LPEHAQRYPHEFSGGQRQRICIARALALNPKVVIADESVSALDVSIQAQIINLMLDLQRE 511

Query: 220 RG-ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADPRYWP 278
            G A L I+HD+ V E++   + VM  G I E GP Q V   PQ  YT+ L+ A P    
Sbjct: 512 FGIAFLFISHDMAVVERISHRVAVMYLGQIVEMGPRQAVFEQPQHPYTRKLMAAVP---V 568

Query: 279 TTPQSKTGEPLLTVDNI 295
             P  +  E  L VD I
Sbjct: 569 ADPAHRRRERALLVDEI 585