Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 529 a.a., microcin C ABC transporter ATP-binding protein YejF from Klebsiella michiganensis M5al

 Score =  220 bits (561), Expect = 8e-62
 Identities = 168/499 (33%), Positives = 261/499 (52%), Gaps = 46/499 (9%)

Query: 30  LLSVQQLAISTAQE----TLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLR 85
           LL +  L+I+  Q+    ++V  LS ++   + L ++GE+GSGKS+ A +++  LP+   
Sbjct: 5   LLDIDNLSIAFRQQGETTSVVSELSLQIAVGETLALVGESGSGKSVTALSVLRLLPSPPV 64

Query: 86  SQ--GKIALFGQYQHQRTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMG 143
           S   G I   GQ      +     + G ++A++ QEP  +LNP+    +Q+ EV  L  G
Sbjct: 65  SYPTGDIRFHGQSLLHADERTLRGVRGNRIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRG 124

Query: 144 --NHAASAALTDSAFQQVALH---QDLSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEP 198
               AA   + D   ++V +    + L+ YPHQLSGG  QRV    A  T+  LLIADEP
Sbjct: 125 MRKEAARGEILD-CLERVGIRNAPRRLADYPHQLSGGERQRVMIAMALLTRPELLIADEP 183

Query: 199 TKGLDASRRDQIIALLQA---QLTRGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQ 255
           T  LD S + QI+ LL+    +L  G LL ITH++ +  +L   + VM+ G   EQ   Q
Sbjct: 184 TTALDVSVQAQILTLLRELKQELNMG-LLFITHNLSIVRQLADRVAVMQNGRCVEQNGCQ 242

Query: 256 QVLSHPQSDYTKALINADPRYWPTTPQSKTGEPLLTVDNIAM----HRG-------EKCL 304
            +   P+  YT+ L++++P   P  P +     LL  +N+++     +G          +
Sbjct: 243 ALFFAPEHPYTRRLLDSEPSGDPV-PLAPDAPVLLRAENLSIAFPIRKGLLRRVVDHNRV 301

Query: 305 FDSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPS----------QGRIHRLQAIPL 354
            +++SF L AGE LG+ G+SG GKST    LL L+  +          QGR +R Q +PL
Sbjct: 302 VNAVSFHLRAGETLGLVGESGSGKSTTGLALLRLIHSAGAIAFDGEALQGR-NRQQMLPL 360

Query: 355 GKALKL-YQDPPSALAKSVTLQTLLEDVCRQHS-----VERSQ-IPRLLERLALSPNLLS 407
            + +++ +QDP S+L   + +  ++E+  R H       ER Q + + ++ + L P    
Sbjct: 361 RRRMQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLTPAEREQAVIQAMQEVGLDPQSRH 420

Query: 408 RKANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALV 467
           R     SGG+ QR AI RAL+ +P L+V DEPTS LD    A  L L+  L Q+   A +
Sbjct: 421 RYPAAFSGGQRQRIAIARALVVKPQLIVLDEPTSSLDKTVQAQILALLKTLQQKHQLAYI 480

Query: 468 LISHDKLALEKTCHRVLSL 486
            ISHD   +   CH+V+ L
Sbjct: 481 FISHDLRVVRALCHQVMVL 499



 Score =  108 bits (270), Expect = 5e-28
 Identities = 76/232 (32%), Positives = 127/232 (54%), Gaps = 12/232 (5%)

Query: 45  LVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQRTQAE 104
           +V ++SF L A + L ++GE+GSGKS    A++  +     S G IA  G+    R + +
Sbjct: 301 VVNAVSFHLRAGETLGLVGESGSGKSTTGLALLRLI----HSAGAIAFDGEALQGRNRQQ 356

Query: 105 REALWGKQLAVLPQEPWHALNP---IMRAGEQVAEVHRLVMGNHAASAALTDSAFQQVAL 161
              L  +++ V+ Q+P  +LNP   +++  E+   VH+  +       A+   A Q+V L
Sbjct: 357 MLPL-RRRMQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLTPAEREQAVIQ-AMQEVGL 414

Query: 162 H-QDLSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIALLQA--QL 218
             Q   +YP   SGG  QR+A   A   +  L++ DEPT  LD + + QI+ALL+   Q 
Sbjct: 415 DPQSRHRYPAAFSGGQRQRIAIARALVVKPQLIVLDEPTSSLDKTVQAQILALLKTLQQK 474

Query: 219 TRGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALI 270
            + A + I+HD+ V   L   ++V+R+G + EQG  ++V + PQ +YT+ L+
Sbjct: 475 HQLAYIFISHDLRVVRALCHQVMVLRQGEVVEQGECERVFTAPQQEYTRQLL 526