Pairwise Alignments

Query, 486 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 592 a.a., ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  212 bits (539), Expect = 3e-59
 Identities = 166/479 (34%), Positives = 240/479 (50%), Gaps = 53/479 (11%)

Query: 52  ELHAHQALTILGETGSGKSLLANAIIGNLPAGLR-SQGKIALFGQYQHQRTQAEREALWG 110
           E+HA     ++G +GSGKSL A A++G LP G R + G I   G       ++   AL G
Sbjct: 41  EIHA-----LVGASGSGKSLTARAVLGLLPPGARLTHGNIRFEGAQLAHAPESALRALRG 95

Query: 111 KQLAVLPQEPWHALNPIMRAGEQVAE---VHRLVMGNHAASAALTDSAFQQVALHQD--- 164
            ++ ++ Q+P  +LNP+     QVAE   +H+ + G  A + AL       V L +    
Sbjct: 96  DRIGMVFQDPLSSLNPLHTIERQVAEPLAIHKGIRGPRARARAL--ELLDMVGLDEPEAR 153

Query: 165 LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIAL---LQAQLTRG 221
           L+ YPHQLSGG  QRVA   A      LLIADEPT  LD + + QI+ L   L+ +L  G
Sbjct: 154 LASYPHQLSGGQRQRVALAMALANDPALLIADEPTTALDTTVQSQILRLIDTLRHRLGMG 213

Query: 222 ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALINADPRYWPTT- 280
            L+ ++HD+ V   L   I VM  G I E  P  ++ S P S  T+AL+ A+    P   
Sbjct: 214 VLI-VSHDLGVVRSLADVIHVMDAGCIVESAPTTRIFSAPASPVTRALLGAEGPSGPAPL 272

Query: 281 PQSKTGEPLLTV--DNIAMHRGEKCLFD----------SLSFTLSAGEILGISGDSGCGK 328
           P++   +P L    D       ++ LF           S SFTL  GE LG+ G+SG GK
Sbjct: 273 PETTATQPALLEARDMGVTFTRQRGLFGLRKTGHDALVSASFTLRRGECLGVVGESGSGK 332

Query: 329 STLADLLLGLLKPSQGRI----HRLQAI------PLGKALK-LYQDPPSALAKSVTLQTL 377
           STLA  +L L+  S+GR+     RL  +      PL + ++ ++QDP SAL   +T+   
Sbjct: 333 STLALAVLRLIA-SRGRVTLDGQRLDTLDEEALRPLRRKVQAVFQDPFSALNPRMTVAES 391

Query: 378 LEDVCRQHSVE----------RSQIPRLLERLALSPNLLSRKANQVSGGELQRFAILRAL 427
           + +    H  +            +    L+ + LS + + R   ++SGG+ QR  I RAL
Sbjct: 392 IAEGLTTHFPDLRGRQGLKAMHDKTLAALDEVGLSDDFMQRYPGELSGGQCQRVVIARAL 451

Query: 428 LTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISHDKLALEKTCHRVLSL 486
             RP +LV DEPTS LD       + L+ +L    G A + I+HD   +   CHRV+ L
Sbjct: 452 ALRPEVLVLDEPTSSLDRALQFQVVALLRDLQLRHGMACLFITHDLSLVRSFCHRVMVL 510



 Score =  115 bits (287), Expect = 5e-30
 Identities = 86/242 (35%), Positives = 126/242 (52%), Gaps = 15/242 (6%)

Query: 40  TAQETLVESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQ 99
           T  + LV S SF L   + L ++GE+GSGKS LA A++  +     S+G++ L GQ    
Sbjct: 304 TGHDALV-SASFTLRRGECLGVVGESGSGKSTLALAVLRLIA----SRGRVTLDGQRLDT 358

Query: 100 RTQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAE---VHRLVMGNHAASAALTD--- 153
             +     L  K  AV  Q+P+ ALNP M   E +AE    H   +       A+ D   
Sbjct: 359 LDEEALRPLRRKVQAVF-QDPFSALNPRMTVAESIAEGLTTHFPDLRGRQGLKAMHDKTL 417

Query: 154 SAFQQVALHQD-LSKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDASRRDQIIA 212
           +A  +V L  D + +YP +LSGG  QRV    A   +  +L+ DEPT  LD + + Q++A
Sbjct: 418 AALDEVGLSDDFMQRYPGELSGGQCQRVVIARALALRPEVLVLDEPTSSLDRALQFQVVA 477

Query: 213 LLQ-AQLTRG-ALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQSDYTKALI 270
           LL+  QL  G A L ITHD+ +       ++V+ +G + E GP   VL  P +  T+AL+
Sbjct: 478 LLRDLQLRHGMACLFITHDLSLVRSFCHRVMVLHRGHVVEAGPTPVVLDAPATATTRALV 537

Query: 271 NA 272
            A
Sbjct: 538 EA 539



 Score = 78.6 bits (192), Expect = 6e-19
 Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 23/194 (11%)

Query: 302 KCLFDSLSFTLSAGEILGISGDSGCGKSTLADLLLGLLKPSQGRIH-------------- 347
           + +   +  T+  GEI  + G SG GKS  A  +LGLL P     H              
Sbjct: 27  RAVLHGVGLTMRRGEIHALVGASGSGKSLTARAVLGLLPPGARLTHGNIRFEGAQLAHAP 86

Query: 348 --RLQAIPLGKALKLYQDPPSALAKSVTLQTLLEDVCRQHS-----VERSQIPRLLERLA 400
              L+A+   +   ++QDP S+L    T++  + +    H        R++   LL+ + 
Sbjct: 87  ESALRALRGDRIGMVFQDPLSSLNPLHTIERQVAEPLAIHKGIRGPRARARALELLDMVG 146

Query: 401 LS--PNLLSRKANQVSGGELQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIEL 458
           L      L+   +Q+SGG+ QR A+  AL   P LL+ADEPT+ LD    +  L+LI  L
Sbjct: 147 LDEPEARLASYPHQLSGGQRQRVALAMALANDPALLIADEPTTALDTTVQSQILRLIDTL 206

Query: 459 TQEIGCALVLISHD 472
              +G  ++++SHD
Sbjct: 207 RHRLGMGVLIVSHD 220