Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  117 bits (294), Expect = 2e-31
 Identities = 77/253 (30%), Positives = 129/253 (50%), Gaps = 6/253 (2%)

Query: 18  LGVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAPSWGEPLGTDHYGRSNFARLSSAIA 77
           LG+++L   ++L L    +   DP  Q+ +  L  PS   P GTD++GR   +R+     
Sbjct: 27  LGLAILFGWLLLALFAPWVAPFDPIAQNTDIRLLGPSLAHPFGTDNFGRDVLSRVIWGAR 86

Query: 78  TSLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLFGAMVPG 137
             L ++V  V    L+G   G +A +  G +D     L++++LA P L+L+L   A++  
Sbjct: 87  IDLQISVIGVVFPFLIGTCVGALAGYIGGRFDTICMRLIDIILAFPFLVLMLAIMAILGP 146

Query: 138 SFFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHLWPELREDL 197
                Y+A+AL+ WV + R++RS+ L L +     A++  GF    +  RHL P     +
Sbjct: 147 GLGSFYIAMALVGWVSYARLIRSQILVLKQSDFALAAKSLGFGHGRILFRHLLPNA---M 203

Query: 198 FTLACFGAGNAILAL---ASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPILVV 254
           F    F   +A+L L   A++ +L +G++PP AE G M+ E   +   A W+   P L +
Sbjct: 204 FGSIVFSMSDAVLVLLNGAAVSYLGLGVQPPTAEWGTMVAEGQSFITNAWWICTFPGLAI 263

Query: 255 FILVLSFQMLAKG 267
             L + F +LA G
Sbjct: 264 VTLAMGFSLLADG 276