Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  108 bits (269), Expect = 2e-28
 Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 6/256 (2%)

Query: 18  LGVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAP------SWGEPLGTDHYGRSNFAR 71
           +G  LL+++    L    L   DP  QD+   +  P      +W   LGTD  GR   +R
Sbjct: 34  IGAVLLLIIFAGALFAPWLAPYDPYAQDVMLRMKPPVWMANGTWEYVLGTDKLGRDYLSR 93

Query: 72  LSSAIATSLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLF 131
           L      SL + +A    S  +G V G++A +  G  D   S+L+   LAMP +++ L  
Sbjct: 94  LLYGARISLFIGIAAALISGFIGTVMGLLAGYYGGKVDAFISYLITTRLAMPVVMVALAS 153

Query: 132 GAMVPGSFFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHLWP 191
            +++ GS  ++ + +  +LW  F  VVR+    + +   + +++  G +   +    + P
Sbjct: 154 ASLMGGSLKVVIVLLGCLLWDRFAVVVRASVQQIRDAEYVASAQALGCSTLRILVSEILP 213

Query: 192 ELREDLFTLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPI 251
            L   L  +A     +AIL  +++ FL VG++PP    G+M+ E   Y   + WV+A P 
Sbjct: 214 NLVGALIVVATLEMAHAILLESALSFLGVGVQPPTPSWGLMIAEGKPYMFFSPWVIAIPG 273

Query: 252 LVVFILVLSFQMLAKG 267
           + + ILVL   ++  G
Sbjct: 274 VALMILVLGINLVGDG 289