Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  108 bits (269), Expect = 2e-28
 Identities = 68/256 (26%), Positives = 125/256 (48%), Gaps = 6/256 (2%)

Query: 18  LGVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAP------SWGEPLGTDHYGRSNFAR 71
           +G  LL+++++  L    L   DP  QD+   +  P      +W   LGTD  GR   +R
Sbjct: 36  IGAVLLLIILLGALFAPWLAPYDPYAQDVMLRMKPPVWMANGTWDYVLGTDKLGRDYLSR 95

Query: 72  LSSAIATSLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLF 131
           L      SL +  +    S ++G + G++A +  G  D   S+L+   LAMP +++ L  
Sbjct: 96  LLYGARISLFIGFSAALISGIIGTIMGLLAGYFGGKTDALISYLITTRLAMPVVMIALAS 155

Query: 132 GAMVPGSFFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHLWP 191
            +++ GS  ++ + +  +LW  F  VVR+    + +   + +++  G +   +    + P
Sbjct: 156 ASLIGGSLKVVIVLLGCLLWDRFAVVVRAAVQQIRDAEYVASAQALGCSTLRILASEILP 215

Query: 192 ELREDLFTLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPI 251
            L   L  +A     +AIL  +++ FL VG++PP    G+M+ E   Y   + WV+A P 
Sbjct: 216 NLVGALIVVATLEMAHAILLESALSFLGVGVQPPIPSWGLMIAEGKPYMFFSPWVIAIPG 275

Query: 252 LVVFILVLSFQMLAKG 267
           + + +LVL   ++  G
Sbjct: 276 VALMVLVLGINLVGDG 291