Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., peptide ABC transporter, permease protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  100 bits (249), Expect = 4e-26
 Identities = 68/255 (26%), Positives = 119/255 (46%), Gaps = 6/255 (2%)

Query: 19  GVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAPSWGEP------LGTDHYGRSNFARL 72
           G+ ++I L+   L    L    P  Q+    L  PSW         LGTD  GR  F+R+
Sbjct: 32  GLWVIIGLLFFTLFGPWLAPFSPEAQNPKALLLPPSWDPAGTVEHFLGTDDLGRDIFSRI 91

Query: 73  SSAIATSLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLFG 132
              +  +  M++A V ++ LLG V G ++   +G        LL+ LL++P L++ +L  
Sbjct: 92  LHGVQLTFGMSLAVVITALLLGFVIGAISGMMKGLKSSILGHLLDALLSIPSLLMAILVV 151

Query: 133 AMVPGSFFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHLWPE 192
           A++      ++ A+ + L  +F R +       L++  + A+RL G N+  +F   + P 
Sbjct: 152 AVLGPGLGNVFWAVGIALTPQFVRAIHQAIHEELQKEYVTAARLDGANSAQIFWYVIMPN 211

Query: 193 LREDLFTLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPIL 252
           + E +          AIL +A++GFL +G + P  E G M+ +       A W +  P L
Sbjct: 212 VWEVVIIQTTLAISTAILDIAALGFLNLGAQAPSPEWGAMVFQGLDNLLTAPWTMTIPGL 271

Query: 253 VVFILVLSFQMLAKG 267
            +   VL+  ++  G
Sbjct: 272 AILFTVLAVNLVGDG 286