Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  105 bits (262), Expect = 1e-27
 Identities = 67/255 (26%), Positives = 125/255 (49%), Gaps = 6/255 (2%)

Query: 19  GVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAPSWGEP------LGTDHYGRSNFARL 72
           G+  ++++V++ L    +    P + ++  A   P+W E       LGTD  GR   +R+
Sbjct: 60  GLIFIVVIVIVALFAPQVAPHHPYEMNVPMAKMPPAWLEGGQWSYLLGTDALGRDILSRI 119

Query: 73  SSAIATSLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLFG 132
                 SL +    V+ S + G+  G++A + RGW D     L++++L++P L+L +   
Sbjct: 120 IFGARLSLMVGAVVVTLSLVAGVGLGLLAGFLRGWVDIVIMRLMDIILSVPSLLLAIAIV 179

Query: 133 AMVPGSFFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHLWPE 192
           A++         AIA+++   + R+ R+  ++   +  + ASR+ G +   L  + + P 
Sbjct: 180 AILGPGLENAMAAIAVVVLPHYTRLTRAAVMTEATKDYVTASRVAGASKGRLMVKTILPN 239

Query: 193 LREDLFTLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPIL 252
               L   A  G   AIL  A++GFL +G +PP+ E G M+ E   +     W++  P L
Sbjct: 240 TLAPLIVQATLGFSTAILDAAALGFLGLGARPPRPEWGTMLSEAREFVLSHWWIVTFPGL 299

Query: 253 VVFILVLSFQMLAKG 267
            +   VL+F ++  G
Sbjct: 300 AILFTVLAFNLMGDG 314