Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  122 bits (305), Expect = 1e-32
 Identities = 76/247 (30%), Positives = 120/247 (48%)

Query: 18  LGVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAPSWGEPLGTDHYGRSNFARLSSAIA 77
           L + +L+ L+   ++   L  GD    DL   L  PSW   LGTDH GR  F RL +   
Sbjct: 35  LALLVLVALIASAIVGQSLLPGDANAIDLAARLRPPSWEHWLGTDHLGRDIFLRLLAGAG 94

Query: 78  TSLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLFGAMVPG 137
            SL     C++    +G+  G  A    G  D+    + ++ L  P L+L L    ++  
Sbjct: 95  VSLGSVALCLALVLAMGIAVGGAAGVLGGRADQAIMRVTDVFLTFPTLVLSLFMVGVLGS 154

Query: 138 SFFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHLWPELREDL 197
               + +AIAL  W  + R+VR   LSL E+  I A+RL G     +F  HL P     L
Sbjct: 155 GLTNVIIAIALSHWAWYARIVRGIVLSLRERDFILAARLSGAGRVSIFVEHLLPATASQL 214

Query: 198 FTLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPILVVFIL 257
             LA    G+ +L +A + FL +G+ PP AE G+M+ +  ++      ++  P + +F+ 
Sbjct: 215 LVLASLDIGHMMLHVAGLSFLGLGVAPPMAEWGVMINDARQFVWTQPMLMVWPGVALFVS 274

Query: 258 VLSFQML 264
           V++F +L
Sbjct: 275 VMTFNLL 281