Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  108 bits (271), Expect = 1e-28
 Identities = 75/251 (29%), Positives = 122/251 (48%), Gaps = 4/251 (1%)

Query: 19  GVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAPSWGEPLGTDHYGRSNFARLSSAIAT 78
           G++++I L ++ +    L   DP  QDL++ L  PS    LGTDH GR  F+R+     T
Sbjct: 39  GLAVVIALGVVAVFAPALAPYDPLVQDLSQRLRPPSAAHWLGTDHLGRDIFSRV--LCGT 96

Query: 79  SLTMAVACVSSSALL--GLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLFGAMVP 136
            +T+++  +++  +L   L+ G+VA +  G  D       ++ L+ P L+L L   A + 
Sbjct: 97  PITLSIVTIAALTVLPVSLIIGMVAGFFGGIVDAVLMRTTDVFLSFPLLVLALALAAALG 156

Query: 137 GSFFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHLWPELRED 196
                  +AIAL  W    R+VR++T  L +   + A+RL G +A  L    + P +   
Sbjct: 157 PGLVNAVIAIALTAWPPLARLVRAETRRLKQADFVAATRLQGASALRLLSFDILPLVLPA 216

Query: 197 LFTLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPILVVFI 256
             T         IL  AS+GFL +G +PP  E G M+     +     WV   P + +FI
Sbjct: 217 ALTRLSLDLAGMILIAASLGFLGLGAQPPSPEWGAMVAAGRTFLMDQWWVATLPGVAIFI 276

Query: 257 LVLSFQMLAKG 267
           +  +F +L  G
Sbjct: 277 VSFAFNLLGDG 287