Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., ABC transporter permease from Rahnella sp. WP5

 Score =  117 bits (294), Expect = 2e-31
 Identities = 76/254 (29%), Positives = 128/254 (50%), Gaps = 10/254 (3%)

Query: 19  GVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAPSWGEPLGTDHYGRSNFARLSSAIAT 78
           G  ++ L+V++ L   L+   DP  QDL   L +P+     GTD YGR  FAR+      
Sbjct: 31  GGFIVSLIVLVGLFAPLITRHDPYAQDLIDTLLSPNASHWFGTDDYGRDIFARVIYGARI 90

Query: 79  SLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLFGAMVPGS 138
           S+   V  V  + ++G+  G++A     + D    W ++ML A PG++L +L  +++ G 
Sbjct: 91  SIIEVVLSVGLAMIIGIPLGIIAGIAGRYTDMIIMWFMDMLFAFPGIVLAILVVSILGGG 150

Query: 139 FFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAW-----YLFRRHLWPEL 193
              L +AI+L     + R+ R+ TL L +   +EA++  G + +     Y+ R  + P +
Sbjct: 151 LVNLLIAISLFAIPVYARLSRNLTLGLKQMEYVEAAQALGLSNYRIIVHYILRNAIGPII 210

Query: 194 REDLFTLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPILV 253
            +   T     AG  ILA AS+ FL +G++PP  E G MM +   +    +++   P L 
Sbjct: 211 VQSTLT-----AGTVILAAASLSFLGLGVQPPMPEWGTMMSDGRNFLGINIYLSLFPGLA 265

Query: 254 VFILVLSFQMLAKG 267
           + + VL F +L  G
Sbjct: 266 IMLTVLGFNVLGDG 279