Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., ABC transporter permease from Rahnella sp. WP5

 Score =  116 bits (291), Expect = 5e-31
 Identities = 74/249 (29%), Positives = 119/249 (47%)

Query: 19  GVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAPSWGEPLGTDHYGRSNFARLSSAIAT 78
           G  L+I   +L L+   +   DP K D      APS    LGTD  GR   +RL     T
Sbjct: 33  GAVLVITFALLALLAPWISPFDPIKADFMAVRKAPSALHWLGTDELGRDILSRLFWGART 92

Query: 79  SLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLFGAMVPGS 138
           SL      V  + ++G+  G++A + +GW D   S ++  LL+ P L+L +  GA +  S
Sbjct: 93  SLMAGCVSVIIAIVIGVPLGLIAGFWQGWLDSVISRVVEALLSCPFLVLAIALGAFLGPS 152

Query: 139 FFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHLWPELREDLF 198
                +AI L     F R+ R++ +S+  +  IE +R  G    ++  R++ P +   + 
Sbjct: 153 LGNAMIAIGLSSMPIFARLTRAQVMSIRNEEYIEGARAIGLPDRWILWRYVLPNVLSPIL 212

Query: 199 TLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPILVVFILV 258
             A     +AI+  AS+ FL +G +PP A  G M+     +  Q+ W+   P L +F+ V
Sbjct: 213 VQATLAIASAIITEASLSFLGLGQQPPDASWGAMLNTARSFLEQSPWMSIFPGLAIFLTV 272

Query: 259 LSFQMLAKG 267
             F +L  G
Sbjct: 273 QGFNLLGDG 281