Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., ABC transporter, inner membrane component from Phaeobacter inhibens DSM 17395

 Score =  122 bits (307), Expect = 7e-33
 Identities = 71/265 (26%), Positives = 135/265 (50%), Gaps = 1/265 (0%)

Query: 4   QRPNMKLHLSKPQWL-GVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAPSWGEPLGTD 62
           Q+   ++ L KP ++ GV+++ +  +L +   L    DP   D N     PSW  P GTD
Sbjct: 15  QQSRWQIALRKPGFMIGVAIIAVSTLLAIAPGLFAPYDPNFIDYNAVRQPPSWAHPFGTD 74

Query: 63  HYGRSNFARLSSAIATSLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAM 122
             GR + +R+ SA + ++ MAV     + L+G+  G +  + RG  D  F  +++ ++  
Sbjct: 75  MLGRDSLSRVISAYSVNMQMAVLATVFAMLIGVTIGALVGYYRGIADMIFGRVVDAVITF 134

Query: 123 PGLILVLLFGAMVPGSFFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAW 182
           P L+LV+   A++      +Y+AI ++ WV + R++R++ ++ +      A  + G++  
Sbjct: 135 PFLVLVIAVVAVLGPGLINMYIAITVVGWVYYARLMRAEVITQMGNDYASAGVVMGYSDR 194

Query: 183 YLFRRHLWPELREDLFTLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQ 242
            +  RHL P     +          AIL  +S+G+L +G +PPQAE G+++ E   +   
Sbjct: 195 RVIFRHLLPNAITPVIVYWMTDMSLAILLGSSLGYLGLGAQPPQAEWGVLIAEGRNFITT 254

Query: 243 ALWVLAQPILVVFILVLSFQMLAKG 267
           A W+   P + + +  + F ++  G
Sbjct: 255 AWWLSLMPGIAIVLTGIGFSLIGDG 279