Pairwise Alignments

Query, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella sp. ANA-3

 Score = 99.8 bits (247), Expect = 6e-26
 Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 6/255 (2%)

Query: 19  GVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAPSWGEP------LGTDHYGRSNFARL 72
           G+  +  L++L L   ++    P  QD    L  PSW         LGTD  GR  F+RL
Sbjct: 32  GLWTIAFLLLLTLFGPMIAPFSPEAQDPRALLLPPSWDPSGTVAHFLGTDDLGRDIFSRL 91

Query: 73  SSAIATSLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLFG 132
                 +  MA+  V ++  +G + G ++   RG        LL+ LL++P L++ +L  
Sbjct: 92  LHGAHLTFGMALMIVGTALFMGFIIGSLSGMMRGLKSSILGHLLDALLSIPSLLMAILVV 151

Query: 133 AMVPGSFFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHLWPE 192
           A++      ++ A+ + L  +F R +       L++  + A+RL G N+  +F   + P 
Sbjct: 152 AVMGPGLENVFWAVGIALTPQFVRSIHQSVHEELQKEYVTAARLDGANSLQIFWYVIMPN 211

Query: 193 LREDLFTLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPIL 252
           + E +          AIL +A++GFL +G + P  E G M+ +       A W +  P L
Sbjct: 212 VWEVVIIQTTLAISAAILDIAALGFLSLGAQAPSPEWGAMVAQGMDNLLTAPWTVTIPGL 271

Query: 253 VVFILVLSFQMLAKG 267
            +   VL+  ++  G
Sbjct: 272 AILFSVLAINLVGDG 286