Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., peptide transport system permease ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  171 bits (434), Expect = 2e-47
 Identities = 100/310 (32%), Positives = 159/310 (51%), Gaps = 5/310 (1%)

Query: 1   MTKILVHRFYQALFVAWSVGTLTFILMRFIPGDVAYRIAAGRYGYDYVNADAALAVRAEL 60
           M   +  R  Q + +   +  +TF+L+  IP D A +IA GR       A     +R +L
Sbjct: 1   MAAYIARRLLQTVVILLGISFVTFVLLYLIPADPARQIA-GRSA----TAQTVENIREQL 55

Query: 61  GLDRSAFELYLQWLWDLLHLNLGHSLVSSEPVIHAIMHNLGHSLLLAGAATLLSLFIAIP 120
           GL+   +E YL+++  L+  + G S +    V   I   L  SL+L   A    L   + 
Sbjct: 56  GLNLPFYEQYLRYVTGLVQGDFGRSYLQKTEVATLIASRLPASLVLMAGAITCELIFGLT 115

Query: 121 IGVYCGKRTDRWADNLALLTSIMIKAQPVFLIGLGLVILFALQLNWLPVAGFGHPKFLIL 180
           +G+    R     D+  ++ S +  + P F+IG+ L+ +FA++L W P+ G+G    L+L
Sbjct: 116 MGIVAALRRGSRTDDTLMIASFVGVSAPQFVIGILLLYVFAVKLGWFPIGGYGTFAHLVL 175

Query: 181 PALALALGMAAMSSRMIRNATAQVLQSPYYAFARLKGLNHEQAFTRHAQRNIALPVMAFV 240
           P++ L    A   SRM+R++  +V++  +   AR  G    +   RHA  N  LPV+A +
Sbjct: 176 PSVTLGFLGAGWYSRMMRSSLIEVMRQDFIRTARATGAGRAKVLFRHAMPNAILPVIAMI 235

Query: 241 GIQAVSLVEGIVMIESLFSWPGVGHALSHAIFQRDIPMIQGSALVMGLLFVALNTLVDLV 300
           GI     + GIV++ES+F WPG+G     AI + DIP+I G  LV     V  N L DL+
Sbjct: 236 GIDIGLFMSGIVVVESVFGWPGIGQLAWQAIQRVDIPIIMGVTLVSAFAIVLGNLLADLI 295

Query: 301 QYALDPRLRL 310
              +DPR++L
Sbjct: 296 TPLIDPRIKL 305