Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  154 bits (390), Expect = 2e-42
 Identities = 100/309 (32%), Positives = 159/309 (51%), Gaps = 6/309 (1%)

Query: 1   MTKILVHRFYQALFVAWSVGTLTFILMRFIPGDVAYRIAAGRYGYDYVNADAALAVRAEL 60
           M + ++ R  +A+    +V T  F+++R + GD A  +     G D V  DA  A R   
Sbjct: 1   MIRFVLVRLMRAVITILAVVTFAFVVLR-MSGDPAQVML----GPD-VPQDAVDAFRKTW 54

Query: 61  GLDRSAFELYLQWLWDLLHLNLGHSLVSSEPVIHAIMHNLGHSLLLAGAATLLSLFIAIP 120
           GLD+  +  YL ++  +   + G S+      +H ++  +  +L L   A +L L I IP
Sbjct: 55  GLDQPIWIQYLAYIKSIFTGDFGVSMRDKASALHLVLERVPATLQLTLPALILKLMIGIP 114

Query: 121 IGVYCGKRTDRWADNLALLTSIMIKAQPVFLIGLGLVILFALQLNWLPVAGFGHPKFLIL 180
            GVY       +AD   +  +I+    P F++GL LV++F++ L  LP  G       IL
Sbjct: 115 AGVYAALHRQSFADRGVITLAIIGFTVPSFVMGLVLVLIFSVLLGVLPSGGQDTWMHGIL 174

Query: 181 PALALALGMAAMSSRMIRNATAQVLQSPYYAFARLKGLNHEQAFTRHAQRNIALPVMAFV 240
           P + +++G   + +R  R+A  +VL  PY   A  KGL        HA  N A+P++  V
Sbjct: 175 PTITMSIGGIGILARFSRSAMIEVLGQPYIRTASAKGLKWRDVIWSHALPNAAVPIVTIV 234

Query: 241 GIQAVSLVEGIVMIESLFSWPGVGHALSHAIFQRDIPMIQGSALVMGLLFVALNTLVDLV 300
           G    SL+ G V++ES+FSWPG+G  L  ++  RD+ ++Q   L++    V  N +VDL+
Sbjct: 235 GFMVGSLIAGAVVVESIFSWPGIGRLLIVSVSNRDLAVVQCILLIIAAAMVMSNLVVDLL 294

Query: 301 QYALDPRLR 309
              LDPRLR
Sbjct: 295 YGWLDPRLR 303