Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  160 bits (405), Expect = 4e-44
 Identities = 93/312 (29%), Positives = 160/312 (51%), Gaps = 7/312 (2%)

Query: 1   MTKILVHRFYQALFVAWSVGTLTFILMRFIPGDVAYRIAAGRYGYDYVNADAALAVRAEL 60
           M + ++ R +Q + V + V    F++ R +   VA  +           A  A A   ++
Sbjct: 1   MLEFILRRLFQGVLVVFGVTATVFVVTRLVGDPVALMLPLSA-----TEAQRA-AFAQQI 54

Query: 61  GLDRSAFELYLQWLWDLLHLNLGHSLVSSEPVIHAIMHNLGHSLLLAGAATLLSLFIAIP 120
           GLD+     +L+++ D+  L+ G+SL    P I  +   L ++LLL  A    ++ ++IP
Sbjct: 55  GLDQPIATQFLRFVGDIATLDFGNSLWQRRPAIEVVFERLPNTLLLIAAGLGAAVMLSIP 114

Query: 121 IGVYCGKRTDRWADNLALLTSIMIKAQPVFLIGLGLVILFALQLNWLPVAGFGHPKFLIL 180
           +G     R     D L +   ++  A P F +GL  +++FA+ L WLP +G G    L+L
Sbjct: 115 LGAVSALRPGGLVDRLTMSVGLLGLAMPQFWLGLVAIMIFAVTLRWLPTSGMGTAAHLVL 174

Query: 181 PALALALGMAAMSSRMIRNATAQVLQSPYYAFARLKGLNHEQAFTRHAQRNIALPVMAFV 240
           PAL LAL   A  + M+R +    L  PY   AR KGL   +    H  RNI +P ++  
Sbjct: 175 PALTLALTPLARFTMMVRASMIDELNKPYVKTARAKGLGLTRILRVHTLRNILVPFLSIS 234

Query: 241 GIQAVSLVEG-IVMIESLFSWPGVGHALSHAIFQRDIPMIQGSALVMGLLFVALNTLVDL 299
           G + ++ + G  V++E++F+WPG+G     AI + D+ ++Q    V+  L V +   +D+
Sbjct: 235 GWELIATLSGYTVVVETVFAWPGLGLTAVQAIQRGDLFLMQAIVFVIAFLIVLIGIALDI 294

Query: 300 VQYALDPRLRLS 311
           +  A+DPR+ L+
Sbjct: 295 LSKAVDPRMELN 306