Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  157 bits (397), Expect = 3e-43
 Identities = 98/318 (30%), Positives = 168/318 (52%), Gaps = 13/318 (4%)

Query: 3   KILVHRFYQALFVAWSVGTLTFILMRFIPGDVAYRIAAGRYGYDYVNADAALAVRAELGL 62
           ++L  R   ++     V  L F+++  +PGDVA RI     G D   A A   +R++L L
Sbjct: 5   RLLASRILFSVLTLLLVSVLIFLILEALPGDVATRIL----GRD-ATAKALELLRSQLDL 59

Query: 63  DRSAFELYLQWLWDLLHLNLGHSLVSSEPVIHAIMHNLGHSLLLAGAATLLSLFIAIPIG 122
           D+ A   Y QWL D L  +LG S+ +  P+   +   + ++LLL+  A  + L +A+   
Sbjct: 60  DQPALVRYFQWLGDFLRGDLGVSIATGRPITDVLGPRIVNTLLLSLFAFAIYLVLALVPA 119

Query: 123 VYCGKRTDRWADNLALLTSIMIKAQPVFLIGLGLVILFALQLNWLPVAGFGHP------- 175
           +       +  DN+  + ++++ + P FL+   L+ LFA+ +  LP              
Sbjct: 120 IIQATNRGKAVDNIISVITLVLLSLPDFLLATILLFLFAVAVPILPALATISEASTWQET 179

Query: 176 -KFLILPALALALGMAAMSSRMIRNATAQVLQSPYYAFARLKGLNHEQAFTRHAQRNIAL 234
            + ++LPA+ LA+ MA  + R++R++  +VL+S Y   A LKGL       RHA  N  +
Sbjct: 180 LRAMVLPAVTLAIMMAVYAIRVLRDSLIEVLRSDYVRLAELKGLRPTAVLFRHALPNAIV 239

Query: 235 PVMAFVGIQAVSLVEGIVMIESLFSWPGVGHALSHAIFQRDIPMIQGSALVMGLLFVALN 294
           P +    +    L+ G+V++E +FS+PG G  L  A+  RDIP+I+ + ++  +++VA N
Sbjct: 240 PALNVTALNFGFLIGGVVIVERVFSYPGFGTLLIDALQLRDIPLIKATVMISAVVYVAAN 299

Query: 295 TLVDLVQYALDPRLRLSR 312
            + D++   L PRLR SR
Sbjct: 300 LVADVLAVLLQPRLRTSR 317