Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  178 bits (451), Expect = 2e-49
 Identities = 104/311 (33%), Positives = 167/311 (53%), Gaps = 4/311 (1%)

Query: 1   MTKILVHRFYQALFVAWSVGTLTFILMRFIPGDVAYRIAAGRYGYDYVNADAALAVRAEL 60
           M +  + R  Q +     V  L F++   +PG  A  + A   G    +      +  E 
Sbjct: 1   MLRFTLRRVLQIIPTVVVVALLIFVIFSVVPGTFAASLFAD--GRRAADPQMIARLNEEF 58

Query: 61  GLDRSAFELYLQWLWDLLHLNLGHSLVSSEPVIHAIMHNLGHSLLLAGAATLLSLFIAIP 120
           GL++   E ++ ++ DL   +LG S  + +PVI  I   +  SL LA AA + +L I++P
Sbjct: 59  GLNKPLMERFVTYVTDLAQFDLGTSFRTRQPVIDLINDRMWASLQLAIAAMIFALVISVP 118

Query: 121 IGVYCGKRTDRWADNLALLTSIMIKAQPVFLIGLGLVILFALQLNWLPVAGFGHPKF--L 178
           +G     R     D + ++ ++   + P F +GL ++ LFALQLNWLP  G+G   F  L
Sbjct: 119 LGFVAALRPGSVLDTVTMIGAVSGLSMPQFWLGLLMMYLFALQLNWLPSFGYGDGSFRNL 178

Query: 179 ILPALALALGMAAMSSRMIRNATAQVLQSPYYAFARLKGLNHEQAFTRHAQRNIALPVMA 238
           ILPA+ L +   A+ +R  R     VL + +   A  KG++  +    H  RN  + ++ 
Sbjct: 179 ILPAVTLGVTPLALLARTTRAGVLDVLNADFIRTAHSKGMSEAKVVRWHVARNALVLIVT 238

Query: 239 FVGIQAVSLVEGIVMIESLFSWPGVGHALSHAIFQRDIPMIQGSALVMGLLFVALNTLVD 298
            VG+Q  SL+   V+IE LF+WPG+G  L  ++  RDIP++QG+ LV+ L F+ +NT VD
Sbjct: 239 TVGLQFGSLIGQAVVIEKLFAWPGIGSLLVDSVASRDIPVVQGTILVIVLWFLVINTAVD 298

Query: 299 LVQYALDPRLR 309
           L+  A+DPR++
Sbjct: 299 LIYAAIDPRIK 309