Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  164 bits (414), Expect = 3e-45
 Identities = 104/319 (32%), Positives = 159/319 (49%), Gaps = 15/319 (4%)

Query: 1   MTKILVHRFYQALFVAWSVGTLTFILMRFIPGDVAYRIAAGRYGYDYVNADAALAVRAEL 60
           M   ++ R    + V + +  + F++M  IPGD A  I        Y   +    +  +L
Sbjct: 1   MQAYVLKRLVAVVPVLFGLSIIVFLVMGLIPGDTATAILGS-----YATPENVERINRDL 55

Query: 61  GLDRSAFELYLQWLWDLLHLNLGHSLVSSEPVIHAIMHNLGHSLLLAGAATLLSLFIAIP 120
           GLD+   + Y  W+ ++L  + G S   + PV+  ++     +L+LAG + +L   I + 
Sbjct: 56  GLDKPLVQQYAIWIGNVLQGDFGRSFALNRPVLDEVLERFQATLVLAGVSLVLCSVIGLL 115

Query: 121 IGVYCGKRTDRWADNLALLTSIMIKAQPVFLIGLGLVILFALQLNWLPVAGF------GH 174
            GV    R   WAD +     +   + P F +GL L+ LFA+    LP +G       G 
Sbjct: 116 AGVVSAVRQFGWADRVITFFVLAGISTPSFWLGLLLIYLFAVHWRILPASGMYAVYGRGD 175

Query: 175 PK----FLILPALALALGMAAMSSRMIRNATAQVLQSPYYAFARLKGLNHEQAFTRHAQR 230
            K     LILPA  LA+  A + +R+ R A  +VL+  Y   AR KGL   +    HA R
Sbjct: 176 LKDLLLHLILPAATLAVVAAGVIARLTRGAMLEVLRQDYVRTARAKGLPERRVIYAHAFR 235

Query: 231 NIALPVMAFVGIQAVSLVEGIVMIESLFSWPGVGHALSHAIFQRDIPMIQGSALVMGLLF 290
              + V+  +GIQA  ++ G V +E++F WPG+G  L  AI  RDI ++QG  LV+   +
Sbjct: 236 AALVSVVPAIGIQAGFVLGGAVYVETVFQWPGIGAMLVKAISTRDILLVQGGVLVVAASY 295

Query: 291 VALNTLVDLVQYALDPRLR 309
           V  N L D+VQ  LDPR+R
Sbjct: 296 VLFNLLADVVQSMLDPRIR 314