Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., ABC transporter permease from Pseudomonas fluorescens SBW25-INTG

 Score =  176 bits (447), Expect = 5e-49
 Identities = 102/313 (32%), Positives = 170/313 (54%), Gaps = 10/313 (3%)

Query: 3   KILVHRFYQALFVAWSVGTLTFILMRFIPGDVAYRIAAGRYGYDYVNADAALAVRAELGL 62
           + ++ R  Q L V + +  +TF+L+R IPGD A  +   R        DA L +RA+ GL
Sbjct: 7   RFVLSRPLQLLPVLFGISLITFVLVRSIPGDPARALLGSRS-----TPDALLKIRAQYGL 61

Query: 63  DRSAFELYLQWLWDLLHLNLGHSLVSSEPVIHAIMHNLGHSLLLAGAATLLSLFIAIPIG 122
           D+  +  Y  +L +LL  +LG SL+     +  I+  +  +L+L   + +L+L IA+P+ 
Sbjct: 62  DQPLWLQYFYFLKNLLKGDLGQSLLYKVDALKLIVTRIEPTLVLVLGSVVLALLIAVPLA 121

Query: 123 VYCGKRTDRWADNLALLTSIMIKAQPVFLIGLGLVILFALQLNWLPVAGFGHP-----KF 177
               +    WADNL  + + +    P F +GL L++L ++Q    PV+G+G         
Sbjct: 122 TLAARNKGGWADNLIRVFTTVGLGMPAFWLGLMLILLLSVQWGLFPVSGYGRTWLDKAHH 181

Query: 178 LILPALALALGMAAMSSRMIRNATAQVLQSPYYAFARLKGLNHEQAFTRHAQRNIALPVM 237
           ++LP L +AL ++A+  R +R +    LQ+ +   AR +GL+    F RH   N  +P +
Sbjct: 182 MVLPCLTIALALSAVLVRNLRASMLMELQADHVTAARARGLSEAAVFRRHVLPNSLVPAV 241

Query: 238 AFVGIQAVSLVEGIVMIESLFSWPGVGHALSHAIFQRDIPMIQGSALVMGLLFVALNTLV 297
             + +    L+ G V+IESLF+ PG+G  L   IF RD  ++QG A+V+    V +N + 
Sbjct: 242 NLLAVNIGWLISGTVVIESLFAIPGIGQLLVRGIFTRDYMVVQGVAMVLACATVVVNFIA 301

Query: 298 DLVQYALDPRLRL 310
           D+V  ALDPR+++
Sbjct: 302 DVVTVALDPRVKM 314