Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., putative peptide ABC transporter, permease protein from Phaeobacter inhibens DSM 17395

 Score =  166 bits (420), Expect = 7e-46
 Identities = 98/328 (29%), Positives = 168/328 (51%), Gaps = 22/328 (6%)

Query: 1   MTKILVHRFYQALFVAWSVGTLTFILMRFIPGDVAYRIAAGRYGYDYVNADAALAVRAEL 60
           M   ++ R  Q++ V + VG + F + RF+   +   +   R   D V       +RA+L
Sbjct: 1   MLAYIIRRIMQSVLVLFVVGLVAFSMFRFVGDPIENMLGQERTTEDVVR------LRADL 54

Query: 61  GLDRSAFELYLQWLWDLLHLNLGHSLVSSEPVIHAIMHNLGHSLLLAGAATLLSLFIAIP 120
           GLD+     Y ++L +    N G S     PV   ++     +L LA  +  L++ + I 
Sbjct: 55  GLDQPFPVQYWRFLENAAQGNFGLSYRQGRPVADILIERAPATLELALVSGTLAMVLGIG 114

Query: 121 IGVYCGKRTDRWADNLALLTSIMIKAQPVFLIGLGLVILFALQLNWLPVAGFGHPKFL-- 178
           +GV    R D W  N  +  S++  + P FLIG+ L+ +F+++L WLP  G G    L  
Sbjct: 115 LGVLTAIRRDGWLANTIMTASLIGVSLPTFLIGILLIYVFSVELGWLPSFGRGETVMLGQ 174

Query: 179 --------------ILPALALALGMAAMSSRMIRNATAQVLQSPYYAFARLKGLNHEQAF 224
                         +LP++ L L    +  R++R+   +VL++ Y  FAR +GL     +
Sbjct: 175 WSTGFLTKSGLMSLVLPSITLGLYQMTLIMRLVRSEMLEVLRTDYIRFARARGLGERAVY 234

Query: 225 TRHAQRNIALPVMAFVGIQAVSLVEGIVMIESLFSWPGVGHALSHAIFQRDIPMIQGSAL 284
            RHA  N  +PV+  +G+Q  S++   ++ E++F WPGVG    +A+   DIP++    +
Sbjct: 235 FRHALVNTMVPVITIIGLQLGSIIAFAIITETVFQWPGVGLLFINAVQFVDIPVMAAYLM 294

Query: 285 VMGLLFVALNTLVDLVQYALDPRLRLSR 312
           ++ +LFV +N +VDL+ + +DPRLR S+
Sbjct: 295 LISVLFVGINLIVDLLYFLIDPRLRTSK 322