Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., dipeptide transport system permease protein DppB from Phaeobacter inhibens DSM 17395

 Score =  153 bits (386), Expect = 6e-42
 Identities = 97/329 (29%), Positives = 172/329 (52%), Gaps = 23/329 (6%)

Query: 1   MTKILVHRFYQALFVAWSVGTLTFILMRFIPGDVAYRIAAGRYGYDYVNADAALAVRAEL 60
           M   LV R +QA+ V +++  + F +   + GD    +         V+ +    +R EL
Sbjct: 1   MLAYLVKRVFQAIAVMFAISLIGFAIQDNL-GDPLRELVG-----QSVSEEVRQQLRDEL 54

Query: 61  GLDRSAFELYLQWLWDLLHLNLGHSLVSSEPVIHAIMHNLGHSLLLAGAATLLSLFIAIP 120
           GL+ S    Y+++L + L  +LG S    EP +  I+  L  +L L   ATL+ + +++P
Sbjct: 55  GLNDSFVTQYVRFLGNALQGDLGTSYFFKEPALDVILKKLPATLELVMGATLIIVGLSVP 114

Query: 121 IGVYCGKRTDRWADNLALLTSIMIKAQPVFLIGLGLVILFALQLNWLP---------VAG 171
           +GVY   + +     L +  SI+  + PVFL  + ++ +F+++L W P         V G
Sbjct: 115 LGVYTAIKPNTILSRLIMGISIVGISVPVFLTAILMIFVFSVELGWFPSYGRGDVVHVFG 174

Query: 172 FGHPKF--------LILPALALALGMAAMSSRMIRNATAQVLQSPYYAFARLKGLNHEQA 223
           +    F        ++LP++ALA  M  +  R+IR    +VLQS Y  +AR KG+   + 
Sbjct: 175 YWDTNFATADGWVHILLPSVALASIMLPLFVRLIRAEMMEVLQSEYVKYARAKGIRPYRI 234

Query: 224 FTRHAQRNIALPVMAFVGIQAVSLVEGIVMIESLFSWPGVGHALSHAIFQRDIPMIQGSA 283
           +  HA +N  LPV+   G+Q  ++V   ++ E++F WPG+G     A+ + D P+I    
Sbjct: 235 YFIHALKNTLLPVITVGGVQIGTMVAYTILTETVFQWPGMGFMFLEAVNRVDTPLIVAYL 294

Query: 284 LVMGLLFVALNTLVDLVQYALDPRLRLSR 312
           +++G +FV  NT+VDL+   ++P + ++R
Sbjct: 295 IIVGFIFVVTNTIVDLIYGLVNPTVNIAR 323