Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., dipeptide ABC transporter permease DppB from Klebsiella michiganensis M5al

 Score =  159 bits (401), Expect = 1e-43
 Identities = 99/340 (29%), Positives = 172/340 (50%), Gaps = 35/340 (10%)

Query: 1   MTKILVHRFYQALFVAWSVGTLTFILMRFIPGDVAYRIAAGRYGYDYVNADAALAVRAEL 60
           M + ++ R    +     +  LTF  +  IPGD    I AG  G   ++ +    + AE+
Sbjct: 1   MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVM-IMAGERG---ISPERHAQLLAEM 56

Query: 61  GLDRSAFELYLQWLWDLLHLNLGHSLVSSEPVIHAIMHNLGHSLLLAGAATLLSLFIAIP 120
           GLD+  ++ Y+ ++W ++H +LG SL S  PV    +     ++ L   A + ++ + IP
Sbjct: 57  GLDKPMWQQYVNYIWGVMHGDLGISLKSRIPVWEEFVPRFKATMELGVCAMIFAIIVGIP 116

Query: 121 IGVYCGKRTDRWADNLALLTSIMIKAQPVFLIGLGLVILFALQLNWLPVAG--------- 171
           +GV    +     D+ ++  ++   + P+F  G+ L++L ++QLN  PV+G         
Sbjct: 117 VGVLAAVKRGSIFDHTSVGLALTGYSMPIFWWGMMLIMLVSVQLNLTPVSGRISDTVFLD 176

Query: 172 ---------------FGHP-------KFLILPALALALGMAAMSSRMIRNATAQVLQSPY 209
                          +G P         +ILPA+ L     A+  RM R++  +VL   Y
Sbjct: 177 DTLPLTGFMLIDTAIWGEPGDFIDAVMHMILPAVVLGTIPLAVIVRMTRSSMLEVLGEDY 236

Query: 210 YAFARLKGLNHEQAFTRHAQRNIALPVMAFVGIQAVSLVEGIVMIESLFSWPGVGHALSH 269
              AR KGL   +    HA RN  LPV+  +G+Q  +L+ G ++ E++FSWPG+G  L  
Sbjct: 237 IRTARAKGLTRMRVIVVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296

Query: 270 AIFQRDIPMIQGSALVMGLLFVALNTLVDLVQYALDPRLR 309
           A+ +RD P++QG  L++  + + +N LVDL+   ++PR+R
Sbjct: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336