Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., binding-protein-dependent transport system inner membrane protein from Klebsiella michiganensis M5al

 Score =  159 bits (403), Expect = 6e-44
 Identities = 101/314 (32%), Positives = 164/314 (52%), Gaps = 12/314 (3%)

Query: 3   KILVHRFYQALFVAWSVGTLTFILMRFIPGDVAYRIAAGRYGYDYVNADAALA-VRAELG 61
           + L+ R  Q L V   +  +TF+++R IPGD A  +   R      +  AALA +RA+ G
Sbjct: 5   RFLLLRPLQLLPVLLGISLITFMMVRAIPGDPARILLGVR------STPAALARIRAQFG 58

Query: 62  LDRSAFELYLQWLWDLLHLNLGHSLVSSEPVIHAIMHNLGHSLLLAGAATLLSLFIAIPI 121
           LD   +  Y  +L +LL   LG S+V     +  I   L  +L L   + LL++ + +P+
Sbjct: 59  LDEPLWVQYGYFLRNLLQGELGKSIVYRVDTLKLIASRLEPTLWLVLGSVLLAIALTVPL 118

Query: 122 GVYCGKRTDRWADNLALLTSIMIKAQPVFLIGLGLVILFALQLNWLPVAGFGHP-----K 176
                ++  R AD L  L +      P F +G+ L++LF++ L W PV+G+G        
Sbjct: 119 AAMAARQRGRLADRLIRLFTTAGLGFPAFWLGIMLILLFSIVLGWFPVSGYGSDFVDQLH 178

Query: 177 FLILPALALALGMAAMSSRMIRNATAQVLQSPYYAFARLKGLNHEQAFTRHAQRNIALPV 236
            ++LP L +AL ++A+  R +R +    + S Y   AR +G    + F RH   N  +P 
Sbjct: 179 HMVLPCLTVALALSAVLIRNLRASLLMEMNSDYVVAARARGQQERRIFWRHVLPNSLVPT 238

Query: 237 MAFVGIQAVSLVEGIVMIESLFSWPGVGHALSHAIFQRDIPMIQGSALVMGLLFVALNTL 296
           +  + +     +   V+IES+F+ PG+G  L  AIF RD  ++QG  +V  L  VA++ L
Sbjct: 239 INLLAVNIGWFIGSTVVIESVFAIPGLGQLLVKAIFSRDYMVVQGVVMVFALATVAVSLL 298

Query: 297 VDLVQYALDPRLRL 310
            D++  ALDPR++L
Sbjct: 299 ADILTVALDPRIKL 312