Pairwise Alignments

Query, 318 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., dipeptide transport system permease protein from Paraburkholderia bryophila 376MFSha3.1

 Score =  157 bits (396), Expect = 4e-43
 Identities = 103/340 (30%), Positives = 172/340 (50%), Gaps = 32/340 (9%)

Query: 1   MTKILVHRFYQALFVAWSVGTLTFILMRFIPGDVAYRIAAGRYGYDYVNADAALAVRAEL 60
           M + ++ R    +     +  L F L+  IPGD    +  G  G D     AA+     L
Sbjct: 1   MFRFVLRRIGMVIPTFIGITILAFALIHLIPGD-PIEVMMGERGVDPAMHAAAMH---RL 56

Query: 61  GLDRSAFELYLQWLWDLLHLNLGHSLVSSEPVIHAIMHNLGHSLLLAGAATLLSLFIAIP 120
           GLD      Y+ ++   LH +LG S++++  V+   +     ++ L+  A L +L + +P
Sbjct: 57  GLDEPLPMQYVHYIGRALHGDLGTSIITNTSVMGEFLARFPATVELSICAMLFALIVGLP 116

Query: 121 IGVYCGKRTDRWADNLALLTSIMIKAQPVFLIGLGLVILFALQLNWLPVAG-----FGHP 175
            GV+   R     D+  + T++   + P+F  GL L+++F+++L W PV+G     +  P
Sbjct: 117 AGVFAALRRGTAVDHGVMGTALTGYSMPIFWWGLILIMVFSVKLGWTPVSGRIAVEYDIP 176

Query: 176 -----------------------KFLILPALALALGMAAMSSRMIRNATAQVLQSPYYAF 212
                                    LILPA+ L     A+ +RM R++  +VL+  Y   
Sbjct: 177 HVTGFMLVDAMMSTDEGAFKSALSHLILPAIVLGTIPLAVVARMTRSSMLEVLREDYIRT 236

Query: 213 ARLKGLNHEQAFTRHAQRNIALPVMAFVGIQAVSLVEGIVMIESLFSWPGVGHALSHAIF 272
           AR KGL+  +    HA RN  +PV+  +G+Q  +L+ G V+ E+LFSWPG+G  L  AI 
Sbjct: 237 ARAKGLSPGRVIVVHALRNALIPVVTVIGLQVGTLLAGAVLTETLFSWPGIGKWLIDAIG 296

Query: 273 QRDIPMIQGSALVMGLLFVALNTLVDLVQYALDPRLRLSR 312
           +RD P++QG  L++  L + +N +VDL+   L+PR+R +R
Sbjct: 297 RRDYPVVQGGILMIATLVIFVNLVVDLLYGVLNPRIRHTR 336