Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., extracellular solute-binding protein, family 5 from Pseudomonas syringae pv. syringae B728a

 Score = 89.4 bits (220), Expect = 3e-22
 Identities = 103/454 (22%), Positives = 196/454 (43%), Gaps = 35/454 (7%)

Query: 68  ESLVGINENSQPYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQAAATALNHALGK 127
           + LV +N +    P LA +W  S+DG      +R  V +HDG    A +    L+ A   
Sbjct: 55  DKLVDVNPDLTYSPQLATAWNWSEDGKTLTMTLREGVTYHDGEPFDAASVKFNLDRARTL 114

Query: 128 PGVIKQVPIKAITA----QNDQVVIELNTVYRPLAAVLAHYSLAIASPSSYDASGN-VIR 182
           P  +++  + ++ +        V I+L      L + L+  +  + +P +  A G     
Sbjct: 115 PDSLRKSELASVDSVEVIDAKTVAIKLKQADATLVSQLSDRAGMMLAPKA--AQGEFASN 172

Query: 183 LLGTGPYQIAQLQAPHKASVIRFNAYWGKPA-SIETINYLAGHRSESRALLAQTGQADLV 241
            + +GPY+  Q     +  + RF+ YW K A   + + +L    +  R    ++G  D++
Sbjct: 173 PVCSGPYKFVQRVQQDRIVLERFDNYWNKQAYHFDKVVFLPIPDTSVRLANLRSGDLDII 232

Query: 242 YTLDPISIPSLQQSHNLDLYIESMPRTVLIKL-----NNE---HPLLNHADVRQAISLAI 293
             + P  + +++    L +Y  + P    ++L     N E    P+     VR+A  L+I
Sbjct: 233 ERVAPTDVKTVKGDSKLAIY--NTPGLGYMQLMFNIGNGEKANSPMGKDKRVRKAFELSI 290

Query: 294 NREGIAQSVLKLPGSEAHQLFSPALGAWHLADKTQPQRHLATAQTLLANQGWTLNDQGLL 353
           +R+ I Q V +   + + Q F P    ++  +   P R +  ++ LLA  G  L      
Sbjct: 291 DRDAINQVVFEGLYAPSAQPF-PKNSPYYDKELPIPTRDIEKSKALLAQAGVKL------ 343

Query: 354 EREGQAFRVQLLTYADRPELPLIATALQAQLKEIGIQVDIAIDNSSAIPAKHHDGTLEMA 413
                   V  L  A+ P    +   +QA  +E G +V++     + + ++   G  ++ 
Sbjct: 344 -----PLAVD-LKVANNPIAQQVGQIIQAMAEEAGFKVNLIATEYATMLSEQASGNFQIG 397

Query: 414 LIARNFGTIADPLPLLLSDFATHQGSDWGPTNWSSPQFSQLLAELSTESDNARYQQLAAQ 473
           + A  +    DP    +  F T +G       + + +  +LL +  T +D A+ Q L   
Sbjct: 398 MSA--WSGRPDP-DGDIHQFVTCKGGQ-NDGKYCNARLDELLNKARTVNDVAQRQALYND 453

Query: 474 ASQLLADEMPLIPVTYYRQIVSVNKRVAGFSFDP 507
           A +LLADE+P   + +  +I+++   V GF  +P
Sbjct: 454 ALRLLADEVPTAYLYFDPRIIAMRNNVTGFVPNP 487