Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., extracellular solute-binding protein, family 5 from Pseudomonas syringae pv. syringae B728a

 Score =  129 bits (324), Expect = 3e-34
 Identities = 125/496 (25%), Positives = 235/496 (47%), Gaps = 72/496 (14%)

Query: 64  LQVVESLVGINENSQPYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQAAATALNH 123
           L   ESLV    + +  P LAKSW V DD   W F +R +V++ DG+ LTA     +   
Sbjct: 51  LHAFESLVS-RRDDKTLPGLAKSWKVVDD-TTWEFALRDDVKWQDGTPLTADDLVFSFER 108

Query: 124 ALGKPGVIKQVP-----IKAITAQNDQVVI------------ELNTVYRPLAAVLAHYSL 166
           A   PG +         +++I A++D  +I            +++++Y     +++ ++ 
Sbjct: 109 ARNVPGSVASYAGAMRTVESIKARDDHTLIIKTRSPNANLLPDIDSIY-----IVSRHAG 163

Query: 167 AIASPSSYDASGNVIRLLGTGPYQIAQLQAPHKASVIRFNAYWGKPASIETIN--YLAGH 224
           A AS + Y+ SG    ++GTGPY+        +    R + YWG   + + ++  ++A  
Sbjct: 164 AAASSADYN-SGKA--MIGTGPYRFVSFVPGDRTIFARNDNYWGGKPTWDKVDFRFIANA 220

Query: 225 RSESRALLAQTGQADLVYTLDPISIPSLQQSHNLDLYIESMPRTVLI------------- 271
            + + ALLA  G  D++  + P  +  L+++ N++++     R ++I             
Sbjct: 221 ANRTAALLA--GDVDVIDKVSPTDVARLRKTPNVNVFAYQGLRALIIQPSFRAGPNEFIR 278

Query: 272 ----KLNNEHPLLNHADVRQAISLAINREGIAQSVLKLPGSEAHQLFSPALGAWHLADKT 327
               K   E+PLL+   VR+A+SLAINR  I + +++   +EA+Q        ++   K 
Sbjct: 279 DNAGKPLAENPLLD-VRVRKALSLAINRPAINERIMQGTVTEANQWMPANTFGYNPQIKN 337

Query: 328 QPQRHLATAQTLLANQGWTLNDQGLLEREGQAFRVQLLTYADR-PELPLIATALQAQLKE 386
            P   L  A+ LLA  G+            + F++ +    DR P+ P +  A+      
Sbjct: 338 IPY-DLKQAKDLLAQAGFP-----------EGFQLTVHVPGDRYPQAPEVMQAVAQFWTR 385

Query: 387 IGIQVDIAIDNSSAIPAKHHDGTLEMALIARNFGT--IADPLPLLLSDFATHQG---SDW 441
           IG++V + +   +    K +   L +++IA   GT   A  L  +L+   + +G   S+W
Sbjct: 386 IGVKVQLEVLPWAVYAGKANKNELAISVIAWGNGTGEAAYALTNILTTVDSSKGQGASNW 445

Query: 442 GPTNWSSPQFSQLLAELSTESDNARYQQLAAQASQLLADEMPLIPVTYYRQIVSVNKRVA 501
           G  ++S+P   + LA+ + E D AR +++   + Q+++D++ +IP+ +Y+ I +  K   
Sbjct: 446 G--HYSNPLVDKALADSTAEFDEARRRKILQDSVQIVSDDVGIIPLFHYQNIWAARK--- 500

Query: 502 GFSFDPFEINYRVAQM 517
           G   +P   +   A M
Sbjct: 501 GLKVEPLVSDRTAATM 516