Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 504 a.a., peptide ABC transporter from Sinorhizobium meliloti 1021

 Score = 95.5 bits (236), Expect = 4e-24
 Identities = 104/460 (22%), Positives = 202/460 (43%), Gaps = 27/460 (5%)

Query: 57  DGFLFSRLQVVESLVGINENSQPY-PLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQ 115
           D ++FS   V + LV +++      P LA+SWT+SDDGL + F+IR + +F DGS +TA+
Sbjct: 51  DNWVFSN--VFDVLVRVDKTGTKLEPGLAESWTLSDDGLTYTFKIR-DAKFSDGSPITAE 107

Query: 116 AAATALNHALGKPGVIKQVPIKAI----TAQNDQVVIELNTVYRPLAAVLAHYSLAIASP 171
            AA +L       G +     K I     A    +V++L T   P  + LA  ++++ S 
Sbjct: 108 DAAFSLLRIRDHEGSLWSDSYKIIETAEAADPKTLVVKLKTPSAPFLSTLALPNVSVLSK 167

Query: 172 SSYDASGNVIRLLGT---GPYQIAQLQAPHKASVIRFNAYW-GKPASIETINYLAGHRSE 227
            + +A  +    L T   G + + + +   +  + +   +W      ++ + +++     
Sbjct: 168 KAVEAGEDAFAELPTASSGAFTVKEWRRGDRVILEKNPNFWQADRVKLDGVEWISVPDDN 227

Query: 228 SRALLAQTGQADLVYTLDPISIPSLQQSHNLDLYIESMPRTVLIKLNNEHPLLNHADVRQ 287
           +R L  Q GQ D    +    +  L++  NL ++I++  R   + +N+EH +L   +VRQ
Sbjct: 228 TRMLNVQAGQLDTAIFVPFSRVEELKKDPNLTVHIDTSTREDHLLINHEHGMLAKKEVRQ 287

Query: 288 AISLAINREGIAQSVLKLPGSEAHQLFSPALGAWHLADKTQPQRHLATAQTLLANQGWTL 347
           A+ +AI+++ I  +V    G+ A+  + P    +H     Q       A+ +LA  G + 
Sbjct: 288 ALDMAIDKKAIVDTVTFGIGTVANS-YIPKGSLYHYDANYQYPYDPEKAKAMLAEAGASD 346

Query: 348 NDQGLLEREGQAFRVQLLTYADRPELPLIATALQAQLKEIGIQVDIAIDNSSAIPAKHHD 407
                +   G     Q            IA  LQ Q  + G+ V++   ++S        
Sbjct: 347 LTLNYVVNAGNEVDEQ------------IAVLLQQQFAKAGVTVNLQKVDASQSWDMLVA 394

Query: 408 GTLEMALIARNFGTIADPLPLLLSDFATHQGSDWGPTNWSSPQFSQLLAELSTESDNARY 467
           G  +++++      + DP     +    H  +    T ++S +  +L+A    E D A+ 
Sbjct: 395 GDYDISVMYWT-NDVLDP-DQKTTFVLGHDTNMNYMTRYNSEKVKELVAAARLELDPAKR 452

Query: 468 QQLAAQASQLLADEMPLIPVTYYRQIVSVNKRVAGFSFDP 507
           + +     +   D++  I + Y   +    K +  F  +P
Sbjct: 453 EAMYVDIQKTAKDDVHWIDLYYSPYLNVSRKNIENFYQNP 492