Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 526 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score = 91.7 bits (226), Expect = 6e-23
 Identities = 104/461 (22%), Positives = 184/461 (39%), Gaps = 65/461 (14%)

Query: 66  VVESLVGINENSQPYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQAAATALNHAL 125
           + E L+    N +  P LA  W + D    WRF +R  V+FHDG+  TA     ++N   
Sbjct: 59  IYEGLIRYGPNFEIEPALATEWKLIDSKH-WRFTLRKGVKFHDGADFTADDVVASMNRVS 117

Query: 126 GKPGVIK-QVPIKAITAQNDQVVIELNTVYRPLAAVL------------------AHYSL 166
                ++  +P+     + D   +++  V  P A  L                  A    
Sbjct: 118 DPTSPLRGNIPLYVGVKKVDDFTVDIE-VSAPSALFLNDMSNIFMFSAKWLKDNNAEKPT 176

Query: 167 AIASPSSYDASGNVIRLLGTGPYQIAQLQAPHKASVIRFNAYW--GKPASIETINYLAGH 224
            IAS +   A+ N     GTGP+++ + + P   +V+  N  W   K  +++ I Y+   
Sbjct: 177 DIASNTENYATHNT---NGTGPFKL-ESRVPDSKTVLLVNDQWWDQKKHNLDRIEYIPIS 232

Query: 225 RSESRALLAQTGQADLVYTLDPISIPSLQQSHNLDLYIESMPRTVLIKLNNEHPLLN--- 281
            + +R     + + DL+ +     +P L+ S  + +   +  RTV I  N +  L +   
Sbjct: 233 SAATRVAALLSSEIDLLDSAPIQDLPRLESSPGITVSKRTELRTVFIGFNGKEKLEDGRP 292

Query: 282 ----HADVRQAISLAINREGIAQSVLKLPGSEAHQLFSPALGAWHLADKTQPQRHLATAQ 337
                  VRQA+  +I+R+ I + +++     +  L +P +  +  +  T        AQ
Sbjct: 293 NPFLDLRVRQAVEASIDRDLINKKIMRGLARPSGSLIAPEIAGYAKSLDTYQPADSKLAQ 352

Query: 338 TLLANQG--------WTLNDQGLLEREGQAFRVQLLTYADRPELPLIATALQAQLKEIGI 389
            LL + G          +ND+ + E +                   I + +   LK  G 
Sbjct: 353 KLLEDAGQKDLAFTYLCMNDESINEED-------------------ICSGIANMLKRAGF 393

Query: 390 QVDIAIDNSSAIPAKHHDGTLEMALIARNFGTIADPLPLLLSDFATHQGSDWGPTN---W 446
           Q  I +   +    K  +G  +M  ++       D   LL    +T  GS  G +N   W
Sbjct: 394 QPTIDMGPRAVQQPKRTNGKADMFNLSWANEPTLDAYSLLSQVLSTRSGST-GVSNYGGW 452

Query: 447 SSPQFSQLLAELSTESDNARYQQLAAQASQLLADEMPLIPV 487
           S P+   L+ + + E D A+   L  QA ++  D+  LIP+
Sbjct: 453 SYPELDDLVKKAAQEPDTAKRLALEEQALKIAKDKAILIPL 493