Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 514 a.a., dipeptide-binding periplasmic protein from Sinorhizobium meliloti 1021

 Score = 93.2 bits (230), Expect = 2e-23
 Identities = 116/532 (21%), Positives = 217/532 (40%), Gaps = 53/532 (9%)

Query: 22  LALGGAGIWLTKTEPAPSSLEI--SGPFEFNSQDLAKDGFLFSR-LQVVESLVGINENSQ 78
           L L GA +       A   + I  S     N+  + +DG   S  L +VE LVG N   +
Sbjct: 4   LLLAGAALLAMANTAAARDITIAQSSDLRSNNPGVNRDGNTDSIILHIVEGLVGYNNVGE 63

Query: 79  PYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQAAATALNHALGKPGV----IKQ- 133
             PLLAKS+ +S DGL + F++R +V+FH+G  +TA          L KP      +K  
Sbjct: 64  VKPLLAKSFEMSADGLTYTFKLRTDVKFHNGKPMTADDVVWNWTRYL-KPETKWTCLKDF 122

Query: 134 -----VPIKAITAQNDQVVIELNTVYRPLAAVLAHYS------LAIASPSSYDASGNVIR 182
                 P+  + A  D   +E+ T+ +P A  L   S        + SP S  A G+  +
Sbjct: 123 AEGGAAPVAGVKA-TDAATVEI-TLAKPSAVFLGLMSRPECGFTGMISPDSVAADGSFAQ 180

Query: 183 LLGTGPYQIAQLQAPHKASVIRFNAY-----WGKPASI--------ETINYLAGHRSESR 229
            +GTGP+   + +      + +F  Y      GKP  +        + + ++    + + 
Sbjct: 181 PIGTGPFMWGEWKKGEYIHLEKFADYVSPENEGKPDGMVGSKRPLADGVKFMVIPDASTV 240

Query: 230 ALLAQTGQADLVYTLDPISIPSLQQSHNLDLYIESMPRTVLIKLNNEHPLLNHADVRQAI 289
               ++G  D    + P  IP  Q S  + L +       L  +     +L++  VR+A+
Sbjct: 241 KAGLESGVLDTA-EISPDLIPEFQASDTMQLIVARNNGKNLFYIQTRDKVLSNPGVRRAM 299

Query: 290 SLAINREGIAQSVLKLPGSEAHQLFSPALGAWHLADKTQPQRHLATAQTLLANQGWTLND 349
           ++A++ + +  +     G     + S     +    K +    +  A+  LA+ G+    
Sbjct: 300 AMALDLDQLVAAASNGTGEANGSMVSQDSVYFSETQKKRLPYDIEAAKKELADAGY---- 355

Query: 350 QGLLEREGQAFRVQLLTYADRPELPLIATALQAQLKEIGIQVDIAIDNSSAIPAKHHDGT 409
                  G+   +      + P  P  A   QA +++ G+ V I + + +    +   G 
Sbjct: 356 ------NGEPISIIANKRGNVPSFP-AAVMAQAMMQQAGLNVQIEVLDYATQVDRRRSGN 408

Query: 410 LEMALIARNFGTIADPLPLLLSDFATHQGSDWGPTNWSSPQFSQLLAELSTESDNARYQQ 469
            +  +I+++     D  P L+  F      +     W  P+  +L+     E+D  + Q+
Sbjct: 409 YQ--VISQSVAPRLD--PALMYSFYVGDKDENASLMWDDPKAIELMNAAYAEADQVKRQK 464

Query: 470 LAAQASQLLADEMPLIPVTYYRQIVSVNKRVAGFSFDPFEINYRVAQMSFND 521
           +  +  +L+  EMP I +     +    K++ G     ++ N R+ ++S  D
Sbjct: 465 IFDEFHELMLKEMPGIFLYDMIDVWGATKKLKGQPV--WQSNARLWEVSVTD 514