Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 529 a.a., periplasmic binding protein from Sinorhizobium meliloti 1021

 Score = 91.7 bits (226), Expect = 6e-23
 Identities = 99/442 (22%), Positives = 184/442 (41%), Gaps = 35/442 (7%)

Query: 75  ENSQPYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLT-AQAAATALNHA-----LGKP 128
           E   P P +A SW  S D  VW F++R ++ FHDG +LT A   AT   H+      G  
Sbjct: 95  ETGAPLPAIASSWESSADASVWTFKVRNDIAFHDGKKLTVADVIATLKRHSDEGSKSGAL 154

Query: 129 GVIKQVPIKAITAQNDQVVIELNTVYRPLAAVLAHYSLAIASPSSYDASGNVIRLLGTGP 188
           G+++ V  K I  +   +V+ L      L  +L  Y L I      D   N    +GTGP
Sbjct: 155 GLMRSV--KTIEEKAGDLVLTLTEGNADLPLLLTDYHLIIQPGGGGD---NPASPIGTGP 209

Query: 189 YQIAQLQAPHKASVIRFNAYWGKPAS-IETINYLAGHRSESRALLAQTGQADLVYTLDPI 247
           Y++A  +A  +A+  +  A W      ++++  +  + + +R     +GQ   +  +DP 
Sbjct: 210 YKLASYEAGIRATFEKNTADWRSDRGYVDSVEIIVMNDNTARIAALSSGQVHFINGVDPK 269

Query: 248 SIPSLQQSHNLDLYIESMPRTVLIKLNNEHPLLNHADVRQAISLAINREGIAQSVLKLPG 307
           ++P L+++  +++   S        ++ +    ++ D+R A+  AI+R+ I   VL   G
Sbjct: 270 TVPLLKRAPRVEILQTSGKGFYSFLMHCDTAPFDNNDLRLALKYAIDRQAILDRVLGGYG 329

Query: 308 SEAHQLFSPALGAWHLADKTQPQRHLATAQTLLANQGWTLNDQGLLEREGQAFRVQLLTY 367
           +  +    P    + LA +   QR     +     +    +   LL     AF       
Sbjct: 330 TLGNDY--PVNENYALAPEGIEQRAYDPDKAAFHYKKSGHDRPILLRTSDAAF------- 380

Query: 368 ADRPELPLIATALQAQLKEIGIQVDIAIDNSSAIPAKHHDGTLEMALIARNF-GTIADPL 426
              P     +   Q   ++ GI++++          +  DG        + F  +     
Sbjct: 381 ---PGAVDASVLFQESARKAGIEIEVR--------REPEDGYWTNVWNVQPFCPSYWGGR 429

Query: 427 PLLLSDFATH--QGSDWGPTNWSSPQFSQLLAELSTESDNARYQQLAAQASQLLADEMPL 484
           P   S ++T     ++W  T +    F +LL +  +E D A+ ++L    + ++ DE  L
Sbjct: 430 PTQDSRYSTSYLSSAEWNDTRFKRGDFDKLLLQARSELDEAKRKELYHTMALMVRDEGGL 489

Query: 485 IPVTYYRQIVSVNKRVAGFSFD 506
           I   +   + + +  + GF  D
Sbjct: 490 ILPVFNDYVNAASASLKGFVHD 511