Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., dipeptide binding periplasmic protein from Sinorhizobium meliloti 1021

 Score = 91.7 bits (226), Expect = 6e-23
 Identities = 109/487 (22%), Positives = 198/487 (40%), Gaps = 69/487 (14%)

Query: 73  INENSQPYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQAAATALNHAL---GKPG 129
           +N+ S+    LA+SWTVSDDGL + F+++  ++F  G+ +TA+  A +   A+     P 
Sbjct: 75  LNDTSKVVGDLAESWTVSDDGLTYTFKLKSGMKFASGNPITAEDVAYSFERAVKLDKSPA 134

Query: 130 VI--------KQVPIKAITAQNDQVVIELNTVYRP------LAAVLAHY----------- 164
            I          V  KA  A  +  V  ++  Y P      L A +A             
Sbjct: 135 FILTQFGLTGDNVTEKAKAADAETFVFTVDQPYAPSFVLNCLTATVASVVDKKLVLEHVK 194

Query: 165 SLAIASPSSYDAS-GN---VIRLLGTGPYQIAQLQAPHKASVIRFNAYWGKPASIETINY 220
           S+  +    YD   GN        G+GP+++ + +A     + R   ++G+PA +  + Y
Sbjct: 195 SVTPSDEYKYDNDFGNEWLKTGYAGSGPFKLREWRANEVVVLERNENFYGEPAKLARVIY 254

Query: 221 LAGHRSESRALLAQTGQADLVYTLDPISIPSLQQSHNLDLYIESMPRTVL--IKLNNEHP 278
                S  + L  + G  D+   L+P    ++    N DL   S P+  +  I LN ++ 
Sbjct: 255 RHMKESSGQRLALEAGDIDVARNLEPGDYEAV--GKNADLATASAPKGTVYYISLNQKNE 312

Query: 279 LLNHADVRQAISLAINREGIAQSVLKLPGSEAHQLFSPALGAWHLADKTQPQRHLATAQT 338
            L   +V+QA    ++ + I  +++K  G E HQ F P  G     ++      +A A+ 
Sbjct: 313 TLAKPEVQQAFKYLVDYDAIGATLIKGIG-EIHQSFLPK-GVLGALNENPYTFDVAKAKE 370

Query: 339 LLANQGWTLNDQGLLEREGQAFRVQLLTYADRPELPLIATALQAQLKEIGIQVDIAIDNS 398
           LLA  G+              F V +     +P +  +A + Q  L + G++++I   + 
Sbjct: 371 LLAKAGYP-----------DGFTVTMDVRNTQP-VTGVAESFQQTLAQAGVKLEIIPGDG 418

Query: 399 SAIPAKHHDGTLEMAL------------IARNFGTIADPLPLLLSDFATHQGSDWGPTNW 446
                K+     +M +             A  F    D      SD  T++   W    W
Sbjct: 419 KQTLTKYRARNHDMYIGQWGMDYFDPHSNADTFTNNPDN-----SDEGTNKTLAW-RNAW 472

Query: 447 SSPQFSQLLAELSTESDNARYQQLAAQASQLLADEMPLIPVTYYRQIVSVNKRVAGFSFD 506
             P+ S+   +   E D+A+   +  +  + + +  P + +    ++  +   + GF   
Sbjct: 473 DVPELSKKTKDALLERDSAKRADIYKELQKTVLENSPFVFIFQQTEVAGLRGNLQGFKLG 532

Query: 507 P-FEINY 512
           P F+ NY
Sbjct: 533 PSFDTNY 539