Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 526 a.a., ABC transporter substrate-binding protein from Rahnella sp. WP5

 Score =  103 bits (256), Expect = 2e-26
 Identities = 111/454 (24%), Positives = 192/454 (42%), Gaps = 40/454 (8%)

Query: 83  LAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQAAATALNHALGKPGVIKQVPIKAITAQ 142
           LA SWT S D LVW F+++P  +F DGS + A A   +    +     I Q P +A    
Sbjct: 91  LAASWTASPDQLVWTFKLKPGAKFDDGSDVNADAVKWSFERLMK----IGQGPSEAFPKD 146

Query: 143 NDQVVIE-------LNTVYRPLAAVLAHY-------SLAIASPSSYDASGNVIRLLGTGP 188
               V++       L T + P    LA+        ++A A+P+    +       G+GP
Sbjct: 147 MTVTVVDPMTVTFTLKTPFAPFLYTLANDGAGIVNPAIAKANPADEGKAWLAGHTAGSGP 206

Query: 189 YQIAQLQAPHKASVIRFNAYWGKPASIETINYLAGHRSESRALLAQTGQADLVYTLDPIS 248
           Y++ + Q   +  ++    Y G   + + +       S +R L    G  D+  +L    
Sbjct: 207 YKLDRWQKGQQLVLVPNPHYSGTKPAFKRVTVKIIGESATRRLQLSRGDLDIADSLPMDQ 266

Query: 249 IPSLQQSHNLDLYIESMP--RTVLIKLNNEHPLLNHADVRQAISLAINREGIAQSVLKLP 306
           + +L++ + +   +E  P  R   + LNN    LN  D+R+AIS A++ +G+ + +L   
Sbjct: 267 LAALKKENKVA--VEEFPSLRVTYLYLNNGKTPLNQVDLRRAISSAVDYQGMVKGIL--- 321

Query: 307 GSEAHQLFSPALGAWHLADKTQPQRHLATAQTLLANQGWTLNDQGLLEREGQAFRVQLLT 366
           G  A Q+  P        D T  Q  L   Q            +  LE+     +     
Sbjct: 322 GGNAKQMRGPIPDGMWGFDPTAKQYTLDLTQA-----------KADLEKVKDKPQTLDFL 370

Query: 367 YADR-PELPLIATALQAQLKEIGIQVDIAIDNSSAIPAKHHDGTLEMALIARNFGTIADP 425
           Y+D  P    IA ++QA L + GI V +    ++ +  +   G  +++ I       ADP
Sbjct: 371 YSDNDPNWESIALSVQASLGQAGINVKLEKLANATMRDRIGQGDYDIS-IGNWSPDFADP 429

Query: 426 LPLLLSDF-ATHQGSDWGPTNWSSPQFSQLLAELSTESDNARYQQLAAQASQLLADEMPL 484
              +   F +  +G     + +S+P    LL +  + +D  +      QA +++ DE   
Sbjct: 430 YMFMNYWFESDKKGLPGNRSFYSNPDVDALLKKAVSVTDQKQRTDYYQQAQKIVIDEAAY 489

Query: 485 IPVTYYRQIVSVNKRVAGFSFDP-FEINYRVAQM 517
           + +      V++NK V GF F+P  E  + V QM
Sbjct: 490 VYLFQKNYQVAMNKDVKGFVFNPMLEQVFNVGQM 523