Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., ABC transporter substrate-binding protein from Rahnella sp. WP5

 Score = 91.7 bits (226), Expect = 6e-23
 Identities = 108/459 (23%), Positives = 179/459 (38%), Gaps = 60/459 (13%)

Query: 66  VVESLVGINENSQPYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQ-AAATALNHA 124
           + + LV  +E     P LA SW V +D   W F +RP V+FHDGS  TA+   A+    A
Sbjct: 56  IFDGLVNQDEKQLITPALAVSWKVIND-TTWEFALRPGVKFHDGSDFTAKDVIASVKRVA 114

Query: 125 LGKPGVIKQVPIKAITAQNDQV-VIELN------TVYRPLAAVLAHYSLAIASPSSYDAS 177
           L      K  P       ND   V E+N          P   +L + S     P+  +  
Sbjct: 115 LAS----KNSPSAYTPYVNDIADVTEVNPLTVRIVTKAPTPLLLNNLSRVAILPARLETV 170

Query: 178 GNVI-----RLLGTGPYQIAQLQAPHKASVIRFNAYWGKPASIETINYLAGHRSESRALL 232
           G+        ++GTGP++           + R + YWG  A  + +         +R   
Sbjct: 171 GSQTLNEGKDVIGTGPFKFVSWTPDDNVVLARNDQYWGGKAQWDNVTLRVFKNPSARVAA 230

Query: 233 AQTGQADLVYTLDPISIPSLQQSHNLDLYIESMPRTVLIKLNNEHPL------------L 280
            ++G  D++ ++       L +  +L L   +  R + +  + +  +            L
Sbjct: 231 MRSGDVDMIESVPTADGRDLGKQASLHLESVAGNRILYLHPDQDRDVSPFAKGPDGSNPL 290

Query: 281 NHADVRQAISLAINREGIAQSVLKLPGSEAHQL-------FSPALGAWHLADKTQPQRHL 333
              +VR+A+SLAINR+ I   ++   G  A QL       ++P++ A        P    
Sbjct: 291 KKREVREAMSLAINRQAIVDRIMDGQGVPASQLVPKGYFGYTPSIAA--------PVYDP 342

Query: 334 ATAQTLLANQGWTLNDQGLLEREGQAFRVQLLTYADR-PELPLIATALQAQLKEIGIQVD 392
             A+ LLA  G+              F +      DR P    IA AL      +GI+ D
Sbjct: 343 VKAKQLLAQAGYP-----------DGFTLTFHASNDRYPNDSKIAQALGQMFSRVGIKTD 391

Query: 393 IAIDNSSAI--PAKHHDGTLEMALIARNFGTIADPLPLLLSDFATHQGSDWGPTNWSSPQ 450
           +     S     A   D +L M   A   G  +  L  LL  F  + G       +S+P+
Sbjct: 392 VVTMPGSVYFSRASKRDFSLIMGGAAIETGEASGVLGPLLETFGPN-GGQGNRGRYSNPE 450

Query: 451 FSQLLAELSTESDNARYQQLAAQASQLLADEMPLIPVTY 489
           F + L +     D+ + ++L   A+++   +   IP+ +
Sbjct: 451 FDKTLLQARETLDDGQREKLLQHATEIAMKDEGTIPLLF 489