Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., ABC transporter substrate-binding protein from Rhodopseudomonas palustris CGA009

 Score = 90.1 bits (222), Expect = 2e-22
 Identities = 124/510 (24%), Positives = 211/510 (41%), Gaps = 83/510 (16%)

Query: 46  PFEFNSQDLAKDGFLFSRLQVVESLVG--INENSQP---YPLLAKSWTVSD-DGLVWRFQ 99
           P      D     + F+   + + LV   +N   +P    P LA  W V D D   WRF 
Sbjct: 38  PLTTGQPDRGAGAYQFTGYTIYDPLVAWEMNVGDRPGKLVPGLATEWKVDDADKTKWRFT 97

Query: 100 IRPEVQFHDGSQLTAQAAATALNHALGKPG----------VIKQVPIKAITAQNDQVVIE 149
           +R  V+FHDGS   A A    L+  L              V  ++P     A+ D   +E
Sbjct: 98  LRKGVKFHDGSDFNADAVIWNLDKVLNDKAPQFDKRQSAQVKTRLPSVKSYAKIDDSTVE 157

Query: 150 LNTVYRPLAAVLAHYSL--AIASPSSYDASGN-----VIRLLGTGPYQIAQLQAPHKASV 202
           + T  + + +   +  L   ++SP+ Y+  G           GTGP+++ +L     A +
Sbjct: 158 ITT--KTVDSFFPYQMLWFLVSSPAQYEKVGKDWDKFAANPSGTGPFKLTKLVPRELAEL 215

Query: 203 IRFNAYWGKPASIETINYLAGHRSE----SRALLAQTGQADLVYTLDPISIPSLQQS--- 255
            + + YW K    +T   +     E    + ALLA  GQ DL+ T  P ++P L+ +   
Sbjct: 216 TKNDEYWDKSRLPKTDKLVLIPMPEALTRTNALLA--GQVDLIETPAPDAVPQLKAAGMK 273

Query: 256 --HNLDLYIESMPRTVLIKLNNEHPLLNHADV--RQAISLAINREGIAQSVLKLPGSEAH 311
              N+  ++ +   +VL       P     DV  R+A++LAI+RE +   +        +
Sbjct: 274 IVDNVTPHVWNYHLSVL-------PGSPWTDVRLRKALNLAIDREAVVGLM--------N 318

Query: 312 QLFSPALG------AWHLADKTQPQRHLATAQTLLANQGWT----LNDQGLLEREGQAFR 361
            L  PA+G       W      + +  LA A+ L+   G++    L    ++   G    
Sbjct: 319 GLAKPAVGQVDPSSPWFGNPSFKIKYDLAEAKKLVKEAGYSPEKPLKTTFIIANGGTG-- 376

Query: 362 VQLLTYADRPELPLIATALQAQLKEIGIQVDIAIDNSSAIPAKHHDGTLE---MALIARN 418
            Q+L+      LP+    LQ   KEIGI V+  +     +      G  +     + A N
Sbjct: 377 -QMLS------LPM-NEFLQQSFKEIGIDVEFKVVELEVLYTAWRKGAADESNAGITANN 428

Query: 419 FGTI-ADPLPLLLSDFATHQ----GSDWGPTNWSSPQFSQLLAELSTESDNARYQQLAAQ 473
              + +DPL  ++  F + Q    G +WG   + +P+   L+ E  T  +  +  +L AQ
Sbjct: 429 IAYVTSDPLYAIVRFFHSGQVAPVGVNWG--GYKNPKVDALIDEAKTTFEPKKQDELLAQ 486

Query: 474 ASQLLADEMPLIPVTYYRQIVSVNKRVAGF 503
           A  L+ D+  L+ V +     +++ +V  F
Sbjct: 487 AHSLIVDDAALVWVVHDTNPHALSPKVKSF 516