Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 520 a.a., ABC-type dipeptide transport system, periplasmic component from Dechlorosoma suillum PS

 Score = 99.0 bits (245), Expect = 4e-25
 Identities = 117/471 (24%), Positives = 198/471 (42%), Gaps = 88/471 (18%)

Query: 68  ESLVGINENSQPYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQAAATALNHALGK 127
           E+LV ++++ Q  P LA+SW   +    W F++RP V+FHDGS LTA+    +L+    +
Sbjct: 56  ETLVAVDKDGQLVPGLAQSWQAINP-TTWEFKLRPGVKFHDGSPLTAEDVVFSLD----R 110

Query: 128 PGVIKQVP------IKAITAQN--DQVVIELNTV--YRPLAAVLAHY---SLAIASPSSY 174
           P  + Q P       +AI+ +   D   + L T   Y PL   LA     S   A+ ++ 
Sbjct: 111 PASLTQSPGPFTGFTRAISGKKVVDAHTLRLTTAQPYGPLPLDLASIFIVSKKAAAKATT 170

Query: 175 DASGNVIRLLGTGPYQIAQLQAPHKASVIRFNAYWG-KPA-SIETINYLAGHRSESRALL 232
           +   +   L+GTGP+++ + +      + RF+ YWG KPA    T+  L    +   ALL
Sbjct: 171 EDFNSGKALVGTGPFRLVKFRRGEAVELARFDGYWGEKPAWDTLTLRILPADAARLAALL 230

Query: 233 AQTGQADLVYTLDPISIPSLQQSHNLDLYIESMPRTVLIKLN---NEHPL---------- 279
           A  GQ D++  +    +  L++     L      RT+ ++L+   +  P           
Sbjct: 231 A--GQVDMIEGVPGADVARLKKDARFRLEQRVSWRTLFLQLDLFRDASPFVTDLAGKPLA 288

Query: 280 ---LNHADVRQAISLAINREGIAQSVLKLPGSEAHQLFSPAL---GAWHLADKTQPQRHL 333
              L    VRQA+S +INRE +A   L   G  A +L +P +   G    A+   P+   
Sbjct: 289 KNPLKDLKVRQALSRSINREALAARTLDGLGVPASRLVAPGIPGHGQQPAAEPYDPE--- 345

Query: 334 ATAQTLLANQGWT--------------LNDQGLLEREGQAFRVQLLTYADRPELPLIATA 379
             A+ LLA  G+               LND+ +L+   Q F                   
Sbjct: 346 -GAKRLLAEAGYPQGFALTLHGPNNRYLNDEQILQTLAQFF------------------- 385

Query: 380 LQAQLKEIGIQVDIAIDNSSAIPAKHHDGTLEMALIARNFGTIADPLPLLLSDFATHQGS 439
                  IG++  +     +A   +        AL+   +G+++    L        + S
Sbjct: 386 -----GRIGVKTKVETLPLAAYFGRLRHADFSAALL--GWGSLSGDFALRTLLGTPDEKS 438

Query: 440 DWGPTNWSSPQFSQLLAELST---ESDNARYQQLAAQASQLLADEMPLIPV 487
            WG  NW     +++ A++ +    +D AR  + A  A      ++P+IP+
Sbjct: 439 GWGAWNWGRFSDTRVDADIRSALASTDPARRSRAAEAAMDQAMQQLPVIPL 489