Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., peptide ABC transporter, periplasmic peptide-binding protein from Marinobacter adhaerens HP15

 Score = 86.3 bits (212), Expect = 3e-21
 Identities = 103/440 (23%), Positives = 183/440 (41%), Gaps = 57/440 (12%)

Query: 81  PLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQAAATALNH--------ALGKP---- 128
           P LA+SWT  D+  + RF++R  V+FH G++LT        +         A+ KP    
Sbjct: 83  PRLAESWTRVDENTM-RFKLREGVKFHSGNELTTADVKFTFDRLKQSQDFKAIFKPFSGI 141

Query: 129 GVIKQVPIKAITAQNDQVVIELNTVYRPLAAVLAHYS---------LAIASPSSYDASGN 179
            +I     + +T++   +++   T   P  +    YS          AI    +  AS N
Sbjct: 142 NIIDDYTFELVTSEPYPLLLNTATYIFPFDSEF--YSGQTEDGKDKSAILKHGNSFASEN 199

Query: 180 VIRLLGTGPYQIAQLQAPHKASVIRFNAYWG--KPASIETINYLAGHRSESRALLAQTGQ 237
              L GTGPY + + +   +    RF+ YW    P ++  I       + +R     +G 
Sbjct: 200 ---LSGTGPYTVTERKQGVRVEFERFDDYWDTESPGNVGKIVLTPIKENNTRVSALLSGG 256

Query: 238 ADLVYTLDPISIPSLQQSHNLDLYIESMPRTVLIKLNNEH-PLLNHADVRQAISLAINRE 296
            D +  + P  +  ++   + +L   S  R +L  +N +      +  VRQAI+ AIN+E
Sbjct: 257 VDFIAPVPPNDLERIRNDKSANLVTMSGTRIILFHMNQKRVEAFKNPKVRQAIAYAINQE 316

Query: 297 GIAQSVLKLPGSEAHQLFSPALGAWHLADKTQPQRHLATAQTLLANQGWTLNDQGLLERE 356
           GIA  ++K   + A Q+ SP  G     +   P+  +A AQ L+   G+           
Sbjct: 317 GIAAKIMKGFATPAAQM-SPE-GYQGYNESLTPRFDVAKAQELMKEAGYE---------- 364

Query: 357 GQAFRVQLLTYADR-PELPLIATALQAQLKEIGIQVDIAIDNSSAIPAKHHDGTLEMALI 415
              F + ++   +R      IA A+ A L  I I+VD+     +    ++ +   +M +I
Sbjct: 365 -DGFTITMMAPNNRYVNDDKIAQAVAAMLARINIKVDLKTLPKAQYWPEYDNRAADMMMI 423

Query: 416 --------ARNFGTIADPLPLLLSDFATHQGSDWGPTNWSSPQFSQLLAELSTESDNARY 467
                   + NF       P    D  T  G  +   N+ +P+   L+ + + E+D  + 
Sbjct: 424 GWHADTEDSANFYEFLTFCP----DADTGAG-QYNAGNYCNPEIDALVQKANVETDLDKR 478

Query: 468 QQLAAQASQLLADEMPLIPV 487
             +  +  Q L D+   +P+
Sbjct: 479 AAMLQEVEQRLYDDAAFVPL 498