Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 522 a.a., nickel ABC transporter, nickel/metallophore periplasmic binding protein from Klebsiella michiganensis M5al

 Score =  126 bits (317), Expect = 2e-33
 Identities = 121/475 (25%), Positives = 204/475 (42%), Gaps = 41/475 (8%)

Query: 60  LFSRLQVVESLVGINENSQPYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQAAAT 119
           ++++  V E LV    +    P LA SW  S+DG VW F +R +V F +G    A AAA 
Sbjct: 47  MYAQSMVYEPLVKYQADGSVKPWLATSWRHSEDGKVWTFTLRDDVTFSNGEAFDAVAAAE 106

Query: 120 ALNHALGKPG-------VIKQVPIKAITAQNDQVVIELNTVYRPLAAVLA-HYSLAIASP 171
                L           V + V +KA+   + Q  I L + Y P    L+        +P
Sbjct: 107 NFRVVLDNRQRHAWLELVNQIVDVKALDKSHLQ--ITLKSAYYPFLQELSLPRPFRFIAP 164

Query: 172 SSY---DASGNVIRLLGTGPYQIAQLQAPHKASVIRFNAYWGKPASIETINYLAGHRSES 228
           S +   +    +   +GTGP+ + + +      ++R + YWG+   I+ I         +
Sbjct: 165 SQFKDNETLRGIKAPIGTGPWVLKESKLNQYDVLVRNDRYWGEKPHIQKITVKVIPDPTT 224

Query: 229 RALLAQTGQADLVY------TLDPISIPSLQQSHNLDLYIESMP-RTVLIKLNNEHPLLN 281
           RA+  +TG  DL+Y       LD  +  S   ++   L   S P  TV++ LN+     N
Sbjct: 225 RAVAFETGDIDLLYGNEGLLPLDTFARFSHNPAYRTQL---SQPIETVMLALNSAKAPTN 281

Query: 282 HADVRQAISLAINREGIAQSVLKLPGSEAHQLFSPALGAWHLADKTQPQRH-LATAQTLL 340
              VR+A++ A+N++ +  + L      A  LF+P +    +  K  P+R+    A+TLL
Sbjct: 282 ELSVREALNHAVNKKSLIDNALYGTQQVADTLFAPTVPYADIGLK--PRRYDPQQAKTLL 339

Query: 341 ANQGWTL-NDQGLLEREGQAFRVQLLTYADRPELPLIATALQAQLKEIGIQVDIAIDNSS 399
              GW L   + + E+ GQ  RV+L           +A  +QA ++++G+ V +A +  S
Sbjct: 340 EKAGWVLPAGKDIREKNGQPLRVELSFIGTDALSKSMAEIIQADMRQVGVDVALAGEEES 399

Query: 400 AIPAKHHDGTLEMALIARNFGTIADPLPLLLS-------DFATHQGSDWGPTNWSSPQFS 452
           +I A+  DG   M +  R +G   DP   + S       DF   QG          P   
Sbjct: 400 SIYARQRDGRFGM-IFNRTWGAPYDPHAFMSSMRVPSHADFQAQQGLA------DKPVID 452

Query: 453 QLLAELSTESDNARYQQLAAQASQLLADEMPLIPVTYYRQIVSVNKRVAGFSFDP 507
           + + E+    D  + Q L       L ++   +P++Y   +V     +    + P
Sbjct: 453 KEIGEVLETRDETQRQALYRDILTRLHNDAVYLPISYVSMMVVARPELGAIPYAP 507