Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., acetate kinase (RefSeq) from Shewanella sp. ANA-3

 Score = 90.9 bits (224), Expect = 1e-22
 Identities = 127/560 (22%), Positives = 219/560 (39%), Gaps = 92/560 (16%)

Query: 5   NILIKDILMKKRLF---GLILALGGAGIWLTKTEPAPSSLEI---SGPFEFNSQDL---- 54
           ++LI+ + +   +F   GL++A G         +  PS L       P  FN Q +    
Sbjct: 2   SVLIRRLCLSTAVFCMSGLLVACG--------PQRLPSGLVYCSEGNPESFNPQLVTSGT 53

Query: 55  ---AKDGFLFSRLQVVESLVGINENSQPYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQ 111
              A    ++SRL   ++L G     Q  P LA SW  SDDGL +RF +R  V+F   S+
Sbjct: 54  TIDATSHQIYSRLVDYDALSG-----QLVPALATSWAESDDGLSYRFTLRENVKFQHSSR 108

Query: 112 LT------AQAAATALNHALGK----PGVIK-----------QVPIKAITAQNDQVVI-- 148
            T      A     + N  + K     GV +              +K++   ND  VI  
Sbjct: 109 FTPSRDFNADDVLFSFNRIIDKHHPYHGVSRTGYPFFQSIGFSEQVKSVEKINDHEVIFR 168

Query: 149 -------ELNTVYRPLAAVL----AHYSLAIASPSSYDASGNVIRLLGTGPYQIAQLQAP 197
                   L+ +    A +L    A   LA+  P + D        +GTGP+ +      
Sbjct: 169 LARKDASFLSNLATDFAVILSSEYADQQLALGHPENLDHFA-----IGTGPFTLVHYAKN 223

Query: 198 HKASVIRFNAYWGKPASIETINYLAGHRSESRALLAQTGQADLVYTLDPISIPSLQQSHN 257
                 R   +WG+PA ++ + Y    +S  R      G   +        +P ++Q   
Sbjct: 224 EYIRYRRNPDFWGEPAKVDMLVYDITPKSTVRLAKLIAGDCSVSALPKAGELPVIKQHEQ 283

Query: 258 LDLYIESMP--RTVLIKLNNEHPLLNHADVRQAISLAINREGIAQSVLKLPGSEAHQLFS 315
           L+  IES P         N + P L+   VR+A++ A++++ I ++V +    EA  +  
Sbjct: 284 LN--IESQPGLNVAFWAFNTQKPPLDDVRVRRALAYAVDKQNILRAVYQNTAIEAIGVLP 341

Query: 316 PALGAWHLADKT---QPQRHLATAQTLLANQGWTLNDQGLLEREGQAFRVQLLTYADRPE 372
           PA  A+    K     PQ+    A+ LL   G        ++          +  A  P 
Sbjct: 342 PASWAYDSNKKLLDYNPQK----ARDLLKEAG--------IKHLSIDIWAMPVARAYNPN 389

Query: 373 LPLIATALQAQLKEIGIQVDIAIDNSSAIPAKHHDGTLEMALIARNFGTIADP----LPL 428
               A  +Q+ L  IG++V+I   + S    +      +  LI  N    +DP     PL
Sbjct: 390 ALKTAELIQSDLANIGVKVNIISYDWSVFSQRLSRDEYDSVLIGWNADN-SDPDNFFTPL 448

Query: 429 LLSDFATHQGSDWGPTNWSSPQFSQLLAELSTESDNARYQQLAAQASQLLADEMPLIPVT 488
           L     +   S+   + W + +F  +L      S  A  +++  +A   LA+++P++ + 
Sbjct: 449 L---SCSAMQSNNNRSRWCNKEFDAILDRAREVSTQAERKEIYQEAEAFLAEQVPMLSLA 505

Query: 489 YYRQIVSVNKRVAGFSFDPF 508
           + +++      +      PF
Sbjct: 506 HAKRVALSRSNIHDMQLTPF 525